Aniseed - Gene card

Gene 'KH2012:KH.L18.43'

Gene Card

Best human hits

OTOG; OTOGL; VWF

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00011981

Gene Model ID

KH2012:KH.L18.43

Location

KhL18:499771..507147

Transcript Models and Sequences

KH2012:KH.L18.43.v1.A.ND1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000003771
NCBI Reference Sequence	XM_009863164.2

Collections

Gene collection 1 (N. Satoh)

1 result

ciad004o06

Plate: R1CiGC01k10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term	Analysis	Definition
VWF_dom	ProSiteProfiles	VWFC domain
VWF_dom	SMART	VWFC domain
VWF_dom	Pfam	VWFC domain
VWF_dom	ProSitePatterns	VWFC domain
Cystine-knot_cytokine	SUPERFAMILY	Cystine-knot cytokine
VWF_type-D	Pfam	von Willebrand factor, type D domain
TILa_dom	Pfam	TILa domain
Cys_knot_C	ProSiteProfiles	Cystine knot, C-terminal
Ser_inhib-like_sf	SUPERFAMILY	Serine protease inhibitor-like superfamily
Cys_knot_C	SMART	Cystine knot, C-terminal
VWF_type-D	ProSiteProfiles	von Willebrand factor, type D domain
VWF_type-D	SMART	von Willebrand factor, type D domain

GOSlim

21 results

GO Term	Annotation Origin	Type
integrin binding	Blast	molecular function
structural molecule activity	Blast	molecular function
protein binding	Blast	molecular function
extracellular region	Blast	cellular component
extracellular space	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
plasma membrane	Blast	cellular component
membrane	Blast	cellular component
apical plasma membrane	Blast	cellular component
identical protein binding	Blast	molecular function
protein homodimerization activity	Blast	molecular function
protein N-terminus binding	Blast	molecular function
extracellular exosome	Blast	cellular component
enzyme binding	Blast	molecular function
macromolecular complex binding	Blast	molecular function
extracellular region part	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
endomembrane system	Blast	cellular component
intracellular organelle part	Blast	cellular component
intracellular organelle lumen	Blast	cellular component
hydrolase activity	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protease binding	Hs	molecular function	139	1.14e-32
integrin binding	Hs	molecular function	139	1.14e-32
structural molecule activity	Hs	molecular function	117	3.51e-26
protein binding	Hs	molecular function	139	1.14e-32
collagen binding	Hs	molecular function	139	1.14e-32
extracellular region	Hs	cellular component	139	1.14e-32
proteinaceous extracellular matrix	Hs	cellular component	139	1.14e-32
extracellular space	Hs	cellular component	103	4.25e-22
endoplasmic reticulum	Hs	cellular component	139	1.14e-32
plasma membrane	Hs	cellular component	103	4.25e-22
membrane	Hs	cellular component	103	4.25e-22
apical plasma membrane	Hs	cellular component	103	4.25e-22
immunoglobulin binding	Hs	molecular function	139	1.14e-32
extracellular matrix	Hs	cellular component	139	1.14e-32
platelet alpha granule	Hs	cellular component	139	1.14e-32
platelet alpha granule lumen	Hs	cellular component	139	1.14e-32
Weibel-Palade body	Hs	cellular component	139	1.14e-32
identical protein binding	Hs	molecular function	139	1.14e-32
protein homodimerization activity	Hs	molecular function	139	1.14e-32
alpha-L-arabinofuranosidase activity	Hs	molecular function	117	3.51e-26
protein N-terminus binding	Hs	molecular function	139	1.14e-32
chaperone binding	Hs	molecular function	139	1.14e-32
extracellular exosome	Hs	cellular component	139	1.14e-32

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	SMART	molecular function	7.6E-7