Aniseed - Gene card

Gene Card

Best human hits

WDFY3; ZFYVE21; ZFYVE28

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00011973

Gene Model ID

KH2012:KH.L18.36

Location

KhL18:36905..38619

Transcript Models and Sequences

KH2012:KH.L18.36.v1.A.nonSL10-1
KH2012:KH.L18.36.v1.A.nonSL11-1
KH2012:KH.L18.36.v1.A.nonSL12-1
KH2012:KH.L18.36.v1.A.nonSL14-1
KH2012:KH.L18.36.v1.A.nonSL4-1
KH2012:KH.L18.36.v1.A.nonSL5-1
KH2012:KH.L18.36.v1.A.nonSL7-1
KH2012:KH.L18.36.v1.A.nonSL8-1
KH2012:KH.L18.36.v1.A.SL1-1
KH2012:KH.L18.36.v1.A.SL13-1
KH2012:KH.L18.36.v1.A.SL2-1
KH2012:KH.L18.36.v1.A.SL6-1
KH2012:KH.L18.36.v1.A.SL9-1
KH2012:KH.L18.36.v2.A.ND3-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000024804
NCBI Reference Sequence	NM_001078427.1
NCBI Reference Sequence	XM_018815647.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cibd024h20

Plate: R1CiGC37l10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Znf_FYVE_PHD	SUPERFAMILY	Zinc finger, FYVE/PHD-type
Znf_RING/FYVE/PHD	Gene3D	Zinc finger, RING/FYVE/PHD-type
ZFYVE21_C	Pfam	Zinc finger FYVE domain-containing protein 21, C-terminal
Znf_FYVE-rel	ProSiteProfiles	Zinc finger, FYVE-related
ZFYVE21_C_sf	Gene3D	Zinc finger FYVE 21, C-terminal domain superfamily
Znf_FYVE	SMART	FYVE zinc finger
Znf_FYVE	Pfam	FYVE zinc finger

GOSlim

35 results

GO Term	Annotation Origin	Type
binding	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Blast	cellular component
nuclear envelope	Blast	cellular component
nucleolus	Blast	cellular component
cytoplasm	Blast	cellular component
endosome	Orthology	cellular component
cytosol	Orthology	cellular component
plasma membrane	Blast	cellular component
focal adhesion	Orthology	cellular component
membrane	Blast	cellular component
cell junction	Orthology	cellular component
axon	Blast	cellular component
cytoplasmic vesicle	Orthology	cellular component
nuclear membrane	Blast	cellular component
cell projection	Blast	cellular component
metal ion binding	Orthology	molecular function
phosphotransferase activity, alcohol group as acceptor	Orthology	molecular function
organic substance metabolic process	Orthology	biological process
kinase activity	Orthology	molecular function
intracellular organelle part	Orthology	cellular component
whole membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
phosphorylation	Orthology	biological process
transferase activity	Blast	molecular function
anion binding	Blast	molecular function
vacuole	Blast	cellular component
intracellular part	Blast	cellular component
nuclear body	Blast	cellular component
membrane part	Blast	cellular component
early endosome	Blast	cellular component
cytoplasmic part	Blast	cellular component
macromolecular complex	Blast	cellular component
neuronal cell body	Blast	cellular component
vacuolar membrane	Blast	cellular component

GO (Orthology)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
1-phosphatidylinositol-3-phosphate 5-kinase activity	Hs	molecular function
protein binding	Hs	molecular function
endosome	Hs	cellular component
cytosol	Hs	cellular component
focal adhesion	Hs	cellular component
endosome membrane	Hs	cellular component
cell junction	Hs	cellular component
cytoplasmic vesicle	Hs	cellular component
retrograde transport, endosome to Golgi	Hs	biological process
phosphatidylinositol phosphorylation	Hs	biological process
metal ion binding	Hs	molecular function

GO (Blast)

31 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
1-phosphatidylinositol-3-phosphate 5-kinase activity	Hs	molecular function	157	2.06e-47
beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity	Hs	molecular function	65.1	5.75e-12
binding	Hs	molecular function	65.1	5.75e-12
protein binding	Hs	molecular function	157	2.06e-47
1-phosphatidylinositol binding	Hs	molecular function	65.1	5.75e-12
nucleus	Hs	cellular component	65.1	5.75e-12
nuclear envelope	Hs	cellular component	65.1	5.75e-12
nucleolus	Hs	cellular component	65.1	5.75e-12
cytoplasm	Hs	cellular component	68.2	3.58e-13
endosome	Hs	cellular component	157	2.06e-47
autophagosome	Hs	cellular component	65.1	5.75e-12
cytosol	Hs	cellular component	157	2.06e-47
plasma membrane	Hs	cellular component	65.1	5.75e-12
focal adhesion	Hs	cellular component	157	2.06e-47
lipid binding	Hs	molecular function	65.1	5.75e-12
endosome membrane	Hs	cellular component	157	2.06e-47
membrane	Hs	cellular component	68.2	3.58e-13
inclusion body	Hs	cellular component	65.1	5.75e-12
PML body	Hs	cellular component	65.1	5.75e-12
extrinsic component of membrane	Hs	cellular component	65.1	5.75e-12
cell junction	Hs	cellular component	157	2.06e-47
axon	Hs	cellular component	65.1	5.75e-12
cytoplasmic vesicle	Hs	cellular component	157	2.06e-47
early endosome membrane	Hs	cellular component	68.2	3.58e-13
nuclear membrane	Hs	cellular component	65.1	5.75e-12
phosphatidylinositol-3-phosphate binding	Hs	molecular function	68.2	3.58e-13
Atg12-Atg5-Atg16 complex	Hs	cellular component	65.1	5.75e-12
cell projection	Hs	cellular component	65.1	5.75e-12
perikaryon	Hs	cellular component	65.1	5.75e-12
metal ion binding	Hs	molecular function	157	2.06e-47
extrinsic component of autophagosome membrane	Hs	cellular component	65.1	5.75e-12

GO (InterProScan)