Aniseed - Gene card

External Database Gene Card

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No result

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Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cilv006h12

Plate: R1CiGC25o16

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Znf_CCHC	ProSiteProfiles	Zinc finger, CCHC-type
Znf_CCHC_sf	SUPERFAMILY	Zinc finger, CCHC-type superfamily
Znf_CCHC	Pfam	Zinc finger, CCHC-type
Znf_CCHC	SMART	Zinc finger, CCHC-type

GOSlim

20 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
nucleic acid binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleolus	Blast	cellular component
cytoplasm	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
cytosol	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
zinc ion binding	Orthology	molecular function
positive regulation of cell proliferation	Orthology	biological process
positive regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function

GO (Orthology)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
single-stranded DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
RNA binding	Hs	molecular function
single-stranded RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
cytosol	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
cholesterol biosynthetic process	Hs	biological process
zinc ion binding	Hs	molecular function
positive regulation of cell proliferation	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function

GO (Blast)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	110	1.50e-29
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	110	1.50e-29
nucleic acid binding	Hs	molecular function	110	1.50e-29
DNA binding	Hs	molecular function	110	1.50e-29
single-stranded DNA binding	Hs	molecular function	110	1.50e-29
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	110	1.50e-29
RNA binding	Hs	molecular function	110	1.50e-29
single-stranded RNA binding	Hs	molecular function	110	1.50e-29
protein binding	Hs	molecular function	110	1.50e-29
nucleus	Hs	cellular component	110	1.50e-29
nucleolus	Hs	cellular component	53.1	4.10e-08
cytoplasm	Hs	cellular component	110	1.50e-29
endoplasmic reticulum	Hs	cellular component	110	1.50e-29
cytosol	Hs	cellular component	110	1.50e-29
zinc ion binding	Hs	molecular function	110	1.50e-29
metal ion binding	Hs	molecular function	110	1.50e-29

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
nucleic acid binding	SUPERFAMILY	molecular function	6.58E-13
zinc ion binding	SUPERFAMILY	molecular function	6.58E-13

Gene Card

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Transcript Models and Sequences