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GENE CARD

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Gene Card

Best human hits

RGS10; RGS12; RGS14

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00011704

Gene Model ID

KH2012:KH.L166.1

Location

KhL166:30744..46423

Transcript Models and Sequences

  KH2012:KH.L166.1.v1.A.ND2-1
KH2012:KH.L166.1.v2.A.SL1-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000018843
Collections

Gateway full ORF

1 result

cien217940

Plate: VES104_G02

Gene collection 1 (N. Satoh)

1 result

cilv016i03

Plate: R1CiGC26i20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
RBD_dom Pfam Raf-like Ras-binding
RGS Pfam RGS domain
RGS_subdom1/3 Gene3D RGS, subdomain 1/3
RBD_dom SMART Raf-like Ras-binding
RGS_sf SUPERFAMILY RGS domain superfamily
RBD_dom ProSiteProfiles Raf-like Ras-binding
Loco PANTHER Regulator of G-protein signalling Loco
RGS PRINTS RGS domain
Ubiquitin-like_domsf SUPERFAMILY Ubiquitin-like domain superfamily
GoLoco_motif ProSiteProfiles GoLoco motif
RGS SMART RGS domain
RGS ProSiteProfiles RGS domain

GOSlim

43 results

GO Term Annotation Origin Type
GTPase activator activity Orthology molecular function
protein binding Orthology molecular function
intracellular Blast cellular component
nucleus Orthology cellular component
nucleolus Orthology cellular component
cytoplasm Orthology cellular component
centrosome Blast cellular component
microtubule organizing center Blast cellular component
cytosol Orthology cellular component
cytoskeleton Blast cellular component
microtubule Blast cellular component
plasma membrane Orthology cellular component
transcription, DNA-templated Orthology biological process
signal transduction Orthology biological process
microtubule binding Blast molecular function
negative regulation of signal transduction Orthology biological process
membrane Blast cellular component
nuclear body Blast cellular component
protein kinase binding Blast molecular function
cell junction Orthology cellular component
GTPase regulator activity Orthology molecular function
cell projection Orthology cellular component
neuronal cell body Blast cellular component
positive regulation of GTPase activity Orthology biological process
synapse Orthology cellular component
postsynaptic membrane Blast cellular component
regulation of catalytic activity Orthology biological process
G-protein coupled receptor signaling pathway Orthology biological process
intracellular non-membrane-bounded organelle Orthology cellular component
nuclear lumen Orthology cellular component
regulation of signal transduction Orthology biological process
cytoskeletal part Blast cellular component
microtubule cytoskeleton Blast cellular component
guanyl ribonucleotide binding Blast molecular function
anion binding Blast molecular function
purine ribonucleoside binding Blast molecular function
organelle Blast cellular component
postsynapse Blast cellular component
neuron part Blast cellular component
positive regulation of signal transduction Blast biological process
cell projection part Blast cellular component
axon Blast cellular component
synapse part Blast cellular component

GO (Orthology)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
condensed nuclear chromosome Hs cellular component
signal transducer activity, downstream of receptor Hs molecular function
GTPase activator activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
transcription, DNA-templated Hs biological process
signal transduction Hs biological process
regulation of G-protein coupled receptor protein signaling pathway Hs biological process
negative regulation of signal transduction Hs biological process
nuclear matrix Hs cellular component
cell junction Hs cellular component
dendrite Hs cellular component
GTPase regulator activity Hs molecular function
cell projection Hs cellular component
positive regulation of GTPase activity Hs biological process
synapse Hs cellular component
regulation of catalytic activity Hs biological process

GO (Blast)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
condensed nuclear chromosome Hs cellular component 289 5.26e-84
spindle pole Hs cellular component 244 1.89e-72
G-protein alpha-subunit binding Hs molecular function 244 1.89e-72
signal transducer activity, downstream of receptor Hs molecular function 289 5.26e-84
GDP-dissociation inhibitor activity Hs molecular function 244 1.89e-72
GTPase activator activity Hs molecular function 289 5.26e-84
protein binding Hs molecular function 289 5.26e-84
intracellular Hs cellular component 244 1.89e-72
nucleus Hs cellular component 289 5.26e-84
nucleolus Hs cellular component 289 5.26e-84
cytoplasm Hs cellular component 289 5.26e-84
centrosome Hs cellular component 244 1.89e-72
microtubule organizing center Hs cellular component 244 1.89e-72
spindle Hs cellular component 244 1.89e-72
cytosol Hs cellular component 289 5.26e-84
cytoskeleton Hs cellular component 244 1.89e-72
microtubule Hs cellular component 244 1.89e-72
plasma membrane Hs cellular component 289 5.26e-84
microtubule binding Hs molecular function 244 1.89e-72
postsynaptic density Hs cellular component 244 1.89e-72
membrane Hs cellular component 244 1.89e-72
nuclear matrix Hs cellular component 289 5.26e-84
nuclear body Hs cellular component 244 1.89e-72
PML body Hs cellular component 244 1.89e-72
protein kinase binding Hs molecular function 244 1.89e-72
cell junction Hs cellular component 289 5.26e-84
receptor signaling complex scaffold activity Hs molecular function 244 1.89e-72
dendrite Hs cellular component 289 5.26e-84
GTPase regulator activity Hs molecular function 289 5.26e-84
GTPase activating protein binding Hs molecular function 244 1.89e-72
cell projection Hs cellular component 289 5.26e-84
neuronal cell body Hs cellular component 117 1.74e-30
dendritic spine Hs cellular component 244 1.89e-72
axon terminus Hs cellular component 117 1.74e-30
synapse Hs cellular component 289 5.26e-84
postsynaptic membrane Hs cellular component 244 1.89e-72

GO (InterProScan)

7 results

GO Term Analysis Type e-value
G-protein alpha-subunit binding PANTHER molecular function 1.4E-125
signal transducer activity, downstream of receptor Pfam molecular function 5.7E-7
GDP-dissociation inhibitor activity PANTHER molecular function 1.4E-125
GTPase activator activity PANTHER molecular function 1.4E-125
signal transduction Pfam biological process 5.7E-7
GTPase regulator activity ProSiteProfiles molecular function 8.277
G-protein coupled receptor signaling pathway PANTHER biological process 1.4E-125

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