Aniseed - Gene card

Gene 'KH2012:KH.L154.37'

Gene Card

Best human hits

HAUS1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00011577

Gene Model ID

KH2012:KH.L154.37

Location

KhL154:207089..214223

Transcript Models and Sequences

KH2012:KH.L154.37.v1.R.ND2-1
KH2012:KH.L154.37.v2.R.ND3-2
KH2012:KH.L154.37.v3.A.ND4-2
KH2012:KH.L154.37.v4.A.SL1-2
KH2012:KH.L154.37.v5.A.SL5-2

External Database Gene Card

External database links

7 results

Database	Gene ID
ENSEMBL	ENSCING00000023848
NCBI Reference Sequence	NM_001078449.1
NCBI Reference Sequence	XM_009863032.2
NCBI Reference Sequence	XM_009863036.2
NCBI Reference Sequence	XM_009863037.2
NCBI Reference Sequence	XM_009863038.2
NCBI Reference Sequence	XM_009863039.2

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

2 results

cicl016m01

Plate: R1CiGC10m14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Znf_CCCH_sf	SUPERFAMILY	Zinc finger, CCCH-type superfamily
Znf_CCCH	ProSiteProfiles	Zinc finger, CCCH-type
Znf_CCCH	SMART	Zinc finger, CCCH-type
Znf_CCCH	Pfam	Zinc finger, CCCH-type

GOSlim

11 results

GO Term	Annotation Origin	Type
protein binding	Blast	molecular function
cytoplasm	Blast	cellular component
centrosome	Blast	cellular component
microtubule organizing center	Blast	cellular component
cytosol	Blast	cellular component
cytoskeleton	Blast	cellular component
microtubule	Blast	cellular component
metal ion binding	InterProScan	molecular function
cytoskeletal part	Blast	cellular component
microtubule cytoskeleton	Blast	cellular component
macromolecular complex	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
spindle pole	Hs	cellular component	52.0	2.10e-07
protein binding	Hs	molecular function	52.0	2.10e-07
cytoplasm	Hs	cellular component	52.0	2.10e-07
centrosome	Hs	cellular component	52.0	2.10e-07
microtubule organizing center	Hs	cellular component	52.0	2.10e-07
spindle	Hs	cellular component	52.0	2.10e-07
cytosol	Hs	cellular component	52.0	2.10e-07
cytoskeleton	Hs	cellular component	52.0	2.10e-07
microtubule	Hs	cellular component	52.0	2.10e-07
HAUS complex	Hs	cellular component	52.0	2.10e-07

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
metal ion binding	SUPERFAMILY	molecular function	1.44E-10