- Gene 'KH2012:KH.L154.10'
Gene Card
Best human hits
SMTN; SMTNL1; SMTNL2
Unique Gene ID
Cirobu.g00011549
Gene Model ID
KH2012:KH.L154.10
Location
KhL154:459953..494550
External database links
1 result
| Database | Gene ID |
|---|---|
| NCBI Reference Sequence | XM_009863043.2 |
Gateway full ORF
1 result
cien62450
Plate: VES80_B02
Gene collection 1 (N. Satoh)
3 results
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| CH-domain | ProSiteProfiles | Calponin homology domain |
| CH_dom_sf | Gene3D | CH domain superfamily |
| CH-domain | SMART | Calponin homology domain |
| CH_dom_sf | SUPERFAMILY | CH domain superfamily |
| SMTN | Pfam | Smoothelin |
| CH-domain | CDD | Calponin homology domain |
| CH-domain | Pfam | Calponin homology domain |
GOSlim
12 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| actin binding | Blast | molecular function |
| protein binding | Orthology | molecular function |
| calmodulin binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| cytoskeleton | Blast | cellular component |
| cytoskeletal protein binding | Blast | molecular function |
| enzyme binding | Blast | molecular function |
| structural molecule activity | Blast | molecular function |
| cytoplasmic part | Blast | cellular component |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| organelle part | Blast | cellular component |
GO (Orthology)
1 result
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| protein binding | Hs | molecular function |
GO (Blast)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| actin binding | Hs | molecular function | 258 | 8.42e-75 |
| protein binding | Hs | molecular function | 258 | 8.42e-75 |
| calmodulin binding | Hs | molecular function | 162 | 1.64e-43 |
| tropomyosin binding | Hs | molecular function | 162 | 1.64e-43 |
| nucleus | Hs | cellular component | 162 | 1.64e-43 |
| cytoplasm | Hs | cellular component | 258 | 8.42e-75 |
| cytoskeleton | Hs | cellular component | 258 | 8.42e-75 |
| protein phosphatase 1 binding | Hs | molecular function | 162 | 1.64e-43 |
| structural constituent of muscle | Hs | molecular function | 258 | 8.42e-75 |
| actin cytoskeleton | Hs | cellular component | 258 | 8.42e-75 |
| myofibril | Hs | cellular component | 162 | 1.64e-43 |
| M band | Hs | cellular component | 162 | 1.64e-43 |
| I band | Hs | cellular component | 162 | 1.64e-43 |
| contractile fiber | Hs | cellular component | 162 | 1.64e-43 |
| protein self-association | Hs | molecular function | 162 | 1.64e-43 |
| CH domain binding | Hs | molecular function | 162 | 1.64e-43 |
| disordered domain specific binding | Hs | molecular function | 162 | 1.64e-43 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | CDD | molecular function | 3.00711E-25 |
