Aniseed - Gene card

Gene Card

Best human hits

GBA2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00011415

Gene Model ID

KH2012:KH.L152.38

Location

KhL152:239613..252411

Transcript Models and Sequences

KH2012:KH.L152.38.v1.A.nonSL4-1
KH2012:KH.L152.38.v1.A.SL1-1
KH2012:KH.L152.38.v1.A.SL2-1
KH2012:KH.L152.38.v1.A.SL3-1

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

3 results

cieg039o13

Plate: R1CiGC21j12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
6-hairpin_glycosidase_sf	SUPERFAMILY	Six-hairpin glycosidase superfamily
GH116_N	Pfam	Glycosyl-hydrolase family 116, N-terminal
GH116_catalytic	Pfam	Glycosyl-hydrolase family 116, catalytic region
6hp_glycosidase-like_sf	Gene3D	Six-hairpin glycosidase-like superfamily
B_Glucosidase_GBA2-typ	PIRSF	Beta-glucosidase GBA2-type

GOSlim

14 results

GO Term	Annotation Origin	Type
Golgi membrane	Orthology	cellular component
catalytic activity	Orthology	molecular function
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
plasma membrane	Orthology	cellular component
metabolic process	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
hydrolase activity	Orthology	molecular function
organic substance metabolic process	Orthology	biological process
cellular metabolic process	Orthology	biological process
neuron development	Orthology	biological process
central nervous system development	Orthology	biological process

GO (Orthology)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
Golgi membrane	Hs	cellular component
catalytic activity	Hs	molecular function
glucosylceramidase activity	Hs	molecular function
hydrolase activity, hydrolyzing O-glycosyl compounds	Hs	molecular function
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
smooth endoplasmic reticulum	Hs	cellular component
Golgi apparatus	Hs	cellular component
plasma membrane	Hs	cellular component
lipid metabolic process	Hs	biological process
sphingolipid metabolic process	Hs	biological process
glucosylceramide catabolic process	Hs	biological process
glycosphingolipid metabolic process	Hs	biological process
metabolic process	Hs	biological process
bile acid metabolic process	Hs	biological process
beta-glucosidase activity	Hs	molecular function
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
glycoside catabolic process	Hs	biological process
hydrolase activity	Hs	molecular function
hydrolase activity, acting on glycosyl bonds	Hs	molecular function
central nervous system neuron development	Hs	biological process

GO (Blast)