Aniseed - Gene card

Gene Card

Best human hits

IQUB

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00011367

Gene Model ID

KH2012:KH.L149.7

Location

KhL149:23338..30242

Transcript Models and Sequences

KH2012:KH.L149.7.v1.A.SL2-1
KH2012:KH.L149.7.v1.R.ND1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000005129
NCBI Reference Sequence	NM_001161491.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cits036b15

Plate: R1CiGC34h05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Ubiquitin_dom	Pfam	Ubiquitin domain
IQ_motif_EF-hand-BS	ProSiteProfiles	IQ motif, EF-hand binding site
Ubiquitin-like_domsf	SUPERFAMILY	Ubiquitin-like domain superfamily
Ubiquitin_dom	ProSiteProfiles	Ubiquitin domain
IQUB	PANTHER	IQ and ubiquitin-like domain-containing protein

GOSlim

9 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
cell projection organization	Orthology	biological process
cytoplasmic vesicle	Orthology	cellular component
endomembrane system	Orthology	cellular component
cell surface receptor signaling pathway	Orthology	biological process
organelle	Orthology	cellular component
cell projection	Orthology	cellular component
plasma membrane region	Orthology	cellular component
macromolecular complex	Orthology	cellular component

GO (Orthology)

6 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
acrosomal vesicle	Hs	cellular component
protein binding	Hs	molecular function
smoothened signaling pathway	Hs	biological process
cell projection organization	Hs	biological process
motile cilium	Hs	cellular component
cilium assembly	Hs	biological process

GO (Blast)

3 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
acrosomal vesicle	Hs	cellular component	655
protein binding	Hs	molecular function	655
motile cilium	Hs	cellular component	655

GO (InterProScan)