Aniseed - Gene card

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Gene 'KH2012:KH.L147.19'

Gene Card

Best human hits

ACAD9; ACADSB; ACADVL

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00011298

Gene Model ID

KH2012:KH.L147.19

Location

KhL147:126505..128546

Transcript Models and Sequences

KH2012:KH.L147.19.v1.A.nonSL2-1
KH2012:KH.L147.19.v1.A.SL3-1
KH2012:KH.L147.19.v1.R.ND1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000004143
NCBI Reference Sequence	XM_004227015.3

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg045h03

Plate: R1CiGC22h22

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
AcylCoA_DH/oxidase_NM_dom	SUPERFAMILY	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily
AcylCo_DH-like_C	SUPERFAMILY	Acyl-CoA dehydrogenase-like, C-terminal
Acyl-CoA_DH_CS	ProSitePatterns	Acyl-CoA dehydrogenase, conserved site
Acyl-CoA_Oxase/DH_cen-dom	Pfam	Acyl-CoA oxidase/dehydrogenase, central domain
AcylCoA_DH/ox_N_sf	Gene3D	Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily
AcylCo_DH/oxidase_C	Pfam	Acyl-CoA dehydrogenase/oxidase C-terminal
AcylCoA_DH/ox_N	Pfam	Acyl-CoA dehydrogenase/oxidase, N-terminal

GOSlim

20 results

GO Term	Annotation Origin	Type
protein binding	Blast	molecular function
nucleus	Orthology	cellular component
nucleolus	Orthology	cellular component
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component
cytosol	Orthology	cellular component
metabolic process	Orthology	biological process
membrane	Orthology	cellular component
mitochondrial membrane	Orthology	cellular component
flavin adenine dinucleotide binding	Orthology	molecular function
oxidation-reduction process	Orthology	biological process
extracellular exosome	Blast	cellular component
catalytic activity	Orthology	molecular function
organic substance metabolic process	Orthology	biological process
cellular metabolic process	Orthology	biological process
response to stress	Orthology	biological process
anatomical structure development	Orthology	biological process
cell differentiation	Orthology	biological process
intracellular non-membrane-bounded organelle	Orthology	cellular component

GO (Orthology)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
temperature homeostasis	Hs	biological process
acyl-CoA dehydrogenase activity	Hs	molecular function
long-chain-acyl-CoA dehydrogenase activity	Hs	molecular function
nucleus	Hs	cellular component
nucleolus	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial matrix	Hs	cellular component
cytosol	Hs	cellular component
lipid metabolic process	Hs	biological process
fatty acid metabolic process	Hs	biological process
fatty acid beta-oxidation	Hs	biological process
metabolic process	Hs	biological process
fatty acid catabolic process	Hs	biological process
response to cold	Hs	biological process
membrane	Hs	cellular component
oxidoreductase activity	Hs	molecular function
oxidoreductase activity, acting on the CH-CH group of donors	Hs	molecular function
epithelial cell differentiation	Hs	biological process
mitochondrial membrane	Hs	cellular component
fatty acid beta-oxidation using acyl-CoA dehydrogenase	Hs	biological process
mitochondrial nucleoid	Hs	cellular component
negative regulation of fatty acid biosynthetic process	Hs	biological process
flavin adenine dinucleotide binding	Hs	molecular function
oxidation-reduction process	Hs	biological process

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
acyl-CoA dehydrogenase activity	Hs	molecular function	724	0.0
long-chain-acyl-CoA dehydrogenase activity	Hs	molecular function	724	0.0
protein binding	Hs	molecular function	530	0.0
nucleus	Hs	cellular component	724	0.0
nucleolus	Hs	cellular component	724	0.0
mitochondrion	Hs	cellular component	724	0.0
mitochondrial inner membrane	Hs	cellular component	724	0.0
mitochondrial matrix	Hs	cellular component	724	0.0
cytosol	Hs	cellular component	724	0.0
membrane	Hs	cellular component	724	0.0
oxidoreductase activity	Hs	molecular function	724	0.0
oxidoreductase activity, acting on the CH-CH group of donors	Hs	molecular function	724	0.0
dendrite	Hs	cellular component	530	0.0
mitochondrial membrane	Hs	cellular component	724	0.0
mitochondrial nucleoid	Hs	cellular component	724	0.0
flavin adenine dinucleotide binding	Hs	molecular function	724	0.0
extracellular exosome	Hs	cellular component	210	1.20e-61
medium-chain-acyl-CoA dehydrogenase activity	Hs	molecular function	530	0.0

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
acyl-CoA dehydrogenase activity	ProSitePatterns	molecular function
metabolic process	SUPERFAMILY	biological process	7.85E-69
oxidoreductase activity, acting on the CH-CH group of donors	Gene3D	molecular function	2.7E-161
flavin adenine dinucleotide binding	Gene3D	molecular function	2.7E-161
oxidation-reduction process	Gene3D	biological process	2.7E-161