Aniseed - Gene card

Gene Card

Best human hits

TUBA3C; TUBA3D; TUBA4A

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010855

Gene Model ID

KH2012:KH.L119.19

Location

KhL119:175754..179570

Transcript Models and Sequences

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000007677
NCBI Reference Sequence	XM_002130166.3

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cicl067a06

Plate: R1CiGC39e18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term	Analysis	Definition
Tubulin_FtsZ_GTPase	Pfam	Tubulin/FtsZ, GTPase domain
Tubulin_C	Gene3D	Tubulin, C-terminal
Tubulin/FtsZ_GTPase_sf	Gene3D	Tubulin/FtsZ, GTPase domain superfamily
Tubulin/FtsZ_2-layer-sand-dom	Pfam	Tubulin/FtsZ, 2-layer sandwich domain
Alpha_tubulin	PRINTS	Alpha tubulin
Tub_FtsZ_C	SUPERFAMILY	Tubulin/FtsZ, C-terminal
Tubulin_CS	ProSitePatterns	Tubulin, conserved site
Tubulin/FtsZ_C_sf	Gene3D	Tubulin/FtsZ, C-terminal domain superfamily
Tubulin/FtsZ_GTPase_sf	SUPERFAMILY	Tubulin/FtsZ, GTPase domain superfamily
Tubulin	PRINTS	Tubulin
Tubulin_FtsZ_GTPase	SMART	Tubulin/FtsZ, GTPase domain
Tubulin/FtsZ_2-layer-sand-dom	SMART	Tubulin/FtsZ, 2-layer sandwich domain
Tubulin	PANTHER	Tubulin

GOSlim

17 results

GO Term	Annotation Origin	Type
nucleotide binding	Blast	molecular function
GTPase activity	Blast	molecular function
protein binding	Blast	molecular function
GTP binding	Blast	molecular function
extracellular region	Blast	cellular component
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
cytoskeleton	Blast	cellular component
microtubule	Blast	cellular component
microtubule-based process	InterProScan	biological process
microtubule cytoskeleton	Blast	cellular component
enzyme binding	Blast	molecular function
protein kinase binding	Blast	molecular function
extracellular exosome	Blast	cellular component
organelle organization	Blast	biological process
structural molecule activity	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
nucleotide binding	Hs	molecular function	874
GTPase activity	Hs	molecular function	874
structural constituent of cytoskeleton	Hs	molecular function	874
protein binding	Hs	molecular function	874
GTP binding	Hs	molecular function	874
extracellular region	Hs	cellular component	870
nucleus	Hs	cellular component	874
cytoplasm	Hs	cellular component	874
cytosol	Hs	cellular component	870
cytoskeleton	Hs	cellular component	874
microtubule	Hs	cellular component	874
microtubule cytoskeleton	Hs	cellular component	874
enzyme binding	Hs	molecular function	870
protein kinase binding	Hs	molecular function	870
extracellular exosome	Hs	cellular component	870

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
GTPase activity	SMART	molecular function	3.1E-80
structural constituent of cytoskeleton	PRINTS	molecular function	1.0E-119
GTP binding	PRINTS	molecular function	1.0E-119
microtubule	PANTHER	cellular component	0.0
microtubule-based process	PANTHER	biological process	0.0

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Gateway full ORF

cien143588

cien163808

Gene collection 1 (N. Satoh)

cieg002n03

cicl067a06

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)