Aniseed - Gene card

Gene Card

Best human hits

SPNS1; SPNS2; SPNS3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010770

Gene Model ID

KH2012:KH.L116.4

Location

KhL116:614930..632627

Transcript Models and Sequences

KH2012:KH.L116.4.v1.A.nonSL8-1
KH2012:KH.L116.4.v1.A.SL1-1
KH2012:KH.L116.4.v1.A.SL2-1
KH2012:KH.L116.4.v2.A.nonSL8-1
KH2012:KH.L116.4.v2.A.SL1-1
KH2012:KH.L116.4.v2.A.SL2-1
KH2012:KH.L116.4.v3.A.ND5-2
KH2012:KH.L116.4.v4.A.nonSL7-1
KH2012:KH.L116.4.v4.R.ND6-1
KH2012:KH.L116.4.v5.A.SL4-1
KH2012:KH.L116.4.v6.A.SL3-1

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000001933
NCBI Reference Sequence	XM_002119807.3
NCBI Reference Sequence	XM_018815116.1
NCBI Reference Sequence	XM_018815117.1

Collections

Gateway full ORF

5 results

Gene collection 1 (N. Satoh)

1 result

cicl007k13

Plate: R1CiGC09m05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
MFS_dom	ProSiteProfiles	Major facilitator superfamily domain
MFS_dom	CDD	Major facilitator superfamily domain
MFS_trans_sf	SUPERFAMILY	MFS transporter superfamily
MFS	Pfam	Major facilitator superfamily

GOSlim

15 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
lysosomal membrane	Orthology	cellular component
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
vesicle	Orthology	cellular component
locomotion	Orthology	biological process
transmembrane transport	Orthology	biological process
immune system process	Orthology	biological process
immune response	Orthology	biological process
G-protein coupled receptor signaling pathway	Orthology	biological process
cellular metabolic process	Orthology	biological process
organic substance transport	Orthology	biological process
animal organ development	Orthology	biological process

GO (Orthology)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
lymphocyte homeostasis	Hs	biological process
regulation of humoral immune response	Hs	biological process
sphingosine-1-phosphate signaling pathway	Hs	biological process
protein binding	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
lysosomal membrane	Hs	cellular component
sphingolipid metabolic process	Hs	biological process
lipid transport	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
vesicle	Hs	cellular component
locomotion	Hs	biological process
T cell homeostasis	Hs	biological process
sphingolipid transporter activity	Hs	molecular function
transmembrane transport	Hs	biological process
bone development	Hs	biological process

GO (Blast)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	428	7.08e-143
mitochondrion	Hs	cellular component	428	7.08e-143
mitochondrial inner membrane	Hs	cellular component	428	7.08e-143
lysosomal membrane	Hs	cellular component	428	7.08e-143
membrane	Hs	cellular component	428	7.08e-143
integral component of membrane	Hs	cellular component	428	7.08e-143
vesicle	Hs	cellular component	428	7.08e-143
sphingolipid transporter activity	Hs	molecular function	428	7.08e-143

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
integral component of membrane	Pfam	cellular component	5.9E-40
transmembrane transport	Pfam	biological process	5.9E-40