Aniseed - Gene card

Gene Card

Best human hits

ANKIB1; RNF19A; RNF19B

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010729

Gene Model ID

KH2012:KH.L114.7

Location

KhL114:40991..58949

Transcript Models and Sequences

KH2012:KH.L114.7.v1.A.SL1-1
KH2012:KH.L114.7.v2.A.SL1-1
KH2012:KH.L114.7.v3.A.SL2-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000001075
ENSEMBL	ENSCING00000018714

Collections

Gene collection 1 (N. Satoh)

1 result

cieg022p11

Plate: R1CiGC19g21

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
E3_UB_ligase_RBR	PANTHER	E3 ubiquitin ligase RBR family
Znf_RING	ProSiteProfiles	Zinc finger, RING-type
IBR_dom	SMART	IBR domain
Znf_RING/FYVE/PHD	Gene3D	Zinc finger, RING/FYVE/PHD-type
IBR_dom	Pfam	IBR domain

GOSlim

25 results

GO Term	Annotation Origin	Type
protein polyubiquitination	Orthology	biological process
immune system process	Orthology	biological process
ubiquitin-protein transferase activity	Orthology	molecular function
protein binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
centrosome	Orthology	cellular component
microtubule organizing center	Orthology	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Orthology	cellular component
transcription factor binding	Orthology	molecular function
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
protein ubiquitination	Orthology	biological process
transferase activity	Orthology	molecular function
metal ion binding	Orthology	molecular function
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
microtubule-based process	Orthology	biological process
organelle organization	Orthology	biological process
immune response	Orthology	biological process
enzyme binding	Orthology	molecular function
proteolysis	Orthology	biological process
lysosome	Orthology	cellular component

GO (Orthology)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
ubiquitin ligase complex	Hs	cellular component
protein polyubiquitination	Hs	biological process
microtubule cytoskeleton organization	Hs	biological process
adaptive immune response	Hs	biological process
immune system process	Hs	biological process
ubiquitin-protein transferase activity	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
centrosome	Hs	cellular component
microtubule organizing center	Hs	cellular component
cytosol	Hs	cellular component
cytoskeleton	Hs	cellular component
transcription factor binding	Hs	molecular function
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
protein ubiquitination	Hs	biological process
transferase activity	Hs	molecular function
ubiquitin conjugating enzyme binding	Hs	molecular function
positive regulation of proteasomal ubiquitin-dependent protein catabolic process	Hs	biological process
cytolytic granule	Hs	cellular component
metal ion binding	Hs	molecular function
ubiquitin protein ligase activity	Hs	molecular function

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ubiquitin ligase complex	Hs	cellular component	241	2.41e-69
ubiquitin-protein transferase activity	Hs	molecular function	241	2.41e-69
protein binding	Hs	molecular function	205	4.43e-57
cytoplasm	Hs	cellular component	241	2.41e-69
endoplasmic reticulum	Hs	cellular component	205	4.43e-57
endoplasmic reticulum membrane	Hs	cellular component	205	4.43e-57
centrosome	Hs	cellular component	241	2.41e-69
microtubule organizing center	Hs	cellular component	241	2.41e-69
cytosol	Hs	cellular component	241	2.41e-69
cytoskeleton	Hs	cellular component	241	2.41e-69
transcription factor binding	Hs	molecular function	241	2.41e-69
membrane	Hs	cellular component	241	2.41e-69
integral component of membrane	Hs	cellular component	241	2.41e-69
transferase activity	Hs	molecular function	241	2.41e-69
ubiquitin conjugating enzyme binding	Hs	molecular function	241	2.41e-69
cytolytic granule	Hs	cellular component	205	4.43e-57
metal ion binding	Hs	molecular function	241	2.41e-69
ubiquitin protein ligase activity	Hs	molecular function	241	2.41e-69

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
ubiquitin-protein transferase activity	PANTHER	molecular function	1.5E-95
protein ubiquitination	PANTHER	biological process	1.5E-95