Aniseed - Gene card

Gene Card

Best human hits

ING2; ING3; ING4

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010662

Gene Model ID

KH2012:KH.L109.1

Location

KhL109:24390..27997

Transcript Models and Sequences

KH2012:KH.L109.1.v1.A.ND1-1
KH2012:KH.L109.1.v1.A.SL4-1
KH2012:KH.L109.1.v2.A.SL2-1
KH2012:KH.L109.1.v2.A.SL3-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000003519
NCBI Reference Sequence	XM_002126942.1
NCBI Reference Sequence	XM_018815060.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

3 results

cicl006h04

Plate: R1CiGC09a11

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Znf_RING/FYVE/PHD	Gene3D	Zinc finger, RING/FYVE/PHD-type
Zinc_finger_PHD-type_CS	ProSitePatterns	Zinc finger, PHD-type, conserved site
ING3	PANTHER	Inhibitor of growth protein 3
ING_N_histone_binding	Pfam	Inhibitor of growth protein, N-terminal histone-binding
Znf_PHD-finger	ProSiteProfiles	Zinc finger, PHD-finger
Znf_PHD	SMART	Zinc finger, PHD-type
Znf_FYVE_PHD	SUPERFAMILY	Zinc finger, FYVE/PHD-type
ING_N_histone_binding	SMART	Inhibitor of growth protein, N-terminal histone-binding

GOSlim

23 results

GO Term	Annotation Origin	Type
DNA binding	Blast	molecular function
chromatin binding	Blast	molecular function
transcription coactivator activity	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
Golgi apparatus	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of apoptotic process	Orthology	biological process
macromolecular complex binding	Blast	molecular function
metal ion binding	Orthology	molecular function
intracellular non-membrane-bounded organelle	Orthology	cellular component
nucleoplasm part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
organelle organization	Orthology	biological process
transferase activity	Orthology	molecular function
cellular protein modification process	Orthology	biological process
nuclear part	Blast	cellular component
anion binding	Blast	molecular function
cytoskeleton	Blast	cellular component

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
Swr1 complex	Hs	cellular component
histone acetyltransferase activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
chromatin organization	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
Piccolo NuA4 histone acetyltransferase complex	Hs	cellular component
methylated histone binding	Hs	molecular function
NuA4 histone acetyltransferase complex	Hs	cellular component
regulation of growth	Hs	biological process
positive regulation of apoptotic process	Hs	biological process
histone H4 acetylation	Hs	biological process
histone H2A acetylation	Hs	biological process
metal ion binding	Hs	molecular function

GO (Blast)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
histone acetyltransferase complex	Hs	cellular component	110	8.16e-28
Swr1 complex	Hs	cellular component	141	7.15e-38
DNA binding	Hs	molecular function	114	3.92e-29
chromatin binding	Hs	molecular function	114	3.92e-29
transcription coactivator activity	Hs	molecular function	110	8.16e-28
histone acetyltransferase activity	Hs	molecular function	141	7.15e-38
protein binding	Hs	molecular function	141	7.15e-38
nucleus	Hs	cellular component	141	7.15e-38
nucleoplasm	Hs	cellular component	141	7.15e-38
Golgi apparatus	Hs	cellular component	114	3.92e-29
cytosol	Hs	cellular component	114	3.92e-29
plasma membrane	Hs	cellular component	114	3.92e-29
Sin3 complex	Hs	cellular component	114	3.92e-29
CCAAT-binding factor complex	Hs	cellular component	114	3.92e-29
Piccolo NuA4 histone acetyltransferase complex	Hs	cellular component	141	7.15e-38
methylated histone binding	Hs	molecular function	141	7.15e-38
phosphatidylinositol binding	Hs	molecular function	114	3.92e-29
NuA4 histone acetyltransferase complex	Hs	cellular component	141	7.15e-38
macromolecular complex binding	Hs	molecular function	114	3.92e-29
intermediate filament cytoskeleton	Hs	cellular component	110	8.16e-28
metal ion binding	Hs	molecular function	141	7.15e-38

GO (InterProScan)