Aniseed - Gene card

Gene 'KH2012:KH.L104.3'

Gene Card

Best human hits

ATL1; ATL2; ATL3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010561

Gene Model ID

KH2012:KH.L104.3

Location

KhL104:20542..29287

Transcript Models and Sequences

KH2012:KH.L104.3.v1.A.SL1-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000022884
NCBI Reference Sequence	XM_018814990.1
NCBI Reference Sequence	XM_018814994.1

Collections

Gateway full ORF

1 result

cien43716

Plate: VES77_B06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
G_GB1_RHD3_dom	ProSiteProfiles	GB1/RHD3-type guanine nucleotide-binding (G) domain
Guanylate-bd_N	Pfam	Guanylate-binding protein, N-terminal
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase

GOSlim

17 results

GO Term	Annotation Origin	Type
Golgi membrane	Blast	cellular component
nucleotide binding	Blast	molecular function
GTPase activity	Blast	molecular function
protein binding	Blast	molecular function
GTP binding	Blast	molecular function
cytoplasm	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
endoplasmic reticulum membrane	Blast	cellular component
Golgi apparatus	Blast	cellular component
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
hydrolase activity	Blast	molecular function
axon	Blast	cellular component
identical protein binding	Blast	molecular function
cell projection	Blast	cellular component
Golgi apparatus part	Blast	cellular component
endoplasmic reticulum part	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
Golgi cis cisterna	Hs	cellular component	186	9.17e-52
Golgi membrane	Hs	cellular component	186	9.17e-52
nucleotide binding	Hs	molecular function	196	1.78e-55
GTPase activity	Hs	molecular function	196	1.78e-55
protein binding	Hs	molecular function	196	1.78e-55
GTP binding	Hs	molecular function	196	1.78e-55
cytoplasm	Hs	cellular component	186	9.17e-52
endoplasmic reticulum	Hs	cellular component	196	1.78e-55
endoplasmic reticulum membrane	Hs	cellular component	196	1.78e-55
Golgi apparatus	Hs	cellular component	186	9.17e-52
membrane	Hs	cellular component	196	1.78e-55
integral component of membrane	Hs	cellular component	196	1.78e-55
hydrolase activity	Hs	molecular function	196	1.78e-55
axon	Hs	cellular component	186	9.17e-52
identical protein binding	Hs	molecular function	196	1.78e-55
cell projection	Hs	cellular component	186	9.17e-52
endoplasmic reticulum tubular network	Hs	cellular component	186	9.17e-52
endoplasmic reticulum tubular network membrane	Hs	cellular component	196	1.78e-55

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
GTPase activity	Pfam	molecular function	5.0E-45
GTP binding	Pfam	molecular function	5.0E-45