Aniseed - Gene card

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Gene 'Phmamm.CG.MTP2014.S9...' >
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Gene 'KH2012:KH.C9.9'

Gene Card

Best human hits

ACADL; ACADS; IVD

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010487

Gene Model ID

KH2012:KH.C9.9

Location

KhC9:5350399..5356995

Transcript Models and Sequences

KH2012:KH.C9.9.v1.A.nonSL7-1
KH2012:KH.C9.9.v1.A.nonSL9-1
KH2012:KH.C9.9.v1.A.SL2-1
KH2012:KH.C9.9.v1.A.SL5-1
KH2012:KH.C9.9.v2.A.ND1-1
KH2012:KH.C9.9.v2.A.SL3-1
KH2012:KH.C9.9.v2.A.SL6-1
KH2012:KH.C9.9.v2.A.SL8-1
KH2012:KH.C9.9.v3.A.ND4-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000009605
ENSEMBL	ENSCING00000020283
NCBI Reference Sequence	XM_002126834.3

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad004j10

Plate: R1CiGC01i10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
AcylCoA_DH/oxidase_NM_dom	SUPERFAMILY	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily
AcylCo_DH/oxidase_C	Pfam	Acyl-CoA dehydrogenase/oxidase C-terminal
Acyl-CoA_DH_CS	ProSitePatterns	Acyl-CoA dehydrogenase, conserved site
Acyl-CoA_Oxase/DH_cen-dom	Pfam	Acyl-CoA oxidase/dehydrogenase, central domain
AcylCo_DH-like_C	SUPERFAMILY	Acyl-CoA dehydrogenase-like, C-terminal
AcylCoA_DH/ox_N_sf	Gene3D	Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily
AcylCoA_DH/ox_N	Pfam	Acyl-CoA dehydrogenase/oxidase, N-terminal

GOSlim

15 results

GO Term	Annotation Origin	Type
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
mitochondrion	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component
metabolic process	Orthology	biological process
mitochondrial membrane	Orthology	cellular component
flavin adenine dinucleotide binding	Orthology	molecular function
oxidation-reduction process	Orthology	biological process
anion binding	Orthology	molecular function
adenyl ribonucleotide binding	Orthology	molecular function
coenzyme binding	Orthology	molecular function
catalytic activity	Orthology	molecular function
organic substance metabolic process	Orthology	biological process
cellular metabolic process	Orthology	biological process
protein homooligomerization	Orthology	biological process

GO (Orthology)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
fatty-acyl-CoA binding	Hs	molecular function
temperature homeostasis	Hs	biological process
acyl-CoA dehydrogenase activity	Hs	molecular function
long-chain-acyl-CoA dehydrogenase activity	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial matrix	Hs	cellular component
lipid metabolic process	Hs	biological process
fatty acid metabolic process	Hs	biological process
fatty acid beta-oxidation	Hs	biological process
metabolic process	Hs	biological process
palmitoyl-CoA oxidase activity	Hs	molecular function
oxidoreductase activity	Hs	molecular function
oxidoreductase activity, acting on the CH-CH group of donors	Hs	molecular function
mitochondrial membrane	Hs	cellular component
fatty acid beta-oxidation using acyl-CoA dehydrogenase	Hs	biological process
long-chain fatty acid catabolic process	Hs	biological process
negative regulation of fatty acid biosynthetic process	Hs	biological process
flavin adenine dinucleotide binding	Hs	molecular function
protein homotetramerization	Hs	biological process
oxidation-reduction process	Hs	biological process

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
fatty-acyl-CoA binding	Hs	molecular function	575	0.0
acyl-CoA dehydrogenase activity	Hs	molecular function	575	0.0
butyryl-CoA dehydrogenase activity	Hs	molecular function	236	1.83e-73
long-chain-acyl-CoA dehydrogenase activity	Hs	molecular function	575	0.0
nucleus	Hs	cellular component	236	1.83e-73
nucleoplasm	Hs	cellular component	236	1.83e-73
mitochondrion	Hs	cellular component	575	0.0
mitochondrial matrix	Hs	cellular component	575	0.0
isovaleryl-CoA dehydrogenase activity	Hs	molecular function	226	1.49e-69
palmitoyl-CoA oxidase activity	Hs	molecular function	575	0.0
oxidoreductase activity	Hs	molecular function	575	0.0
oxidoreductase activity, acting on the CH-CH group of donors	Hs	molecular function	575	0.0
mitochondrial membrane	Hs	cellular component	575	0.0
flavin adenine dinucleotide binding	Hs	molecular function	575	0.0

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
acyl-CoA dehydrogenase activity	ProSitePatterns	molecular function
metabolic process	SUPERFAMILY	biological process	1.31E-83
oxidoreductase activity, acting on the CH-CH group of donors	SUPERFAMILY	molecular function	1.31E-83
flavin adenine dinucleotide binding	Gene3D	molecular function	5.9E-36
oxidation-reduction process	SUPERFAMILY	biological process	1.31E-83