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GENE CARD

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  1. Gene 'KH2012:KH.C9.751'

Gene Card

Best human hits

OBSCN; SPEG; TRIO

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010329

Gene Model ID

KH2012:KH.C9.751

Location

KhC9:35961..55766

Transcript Models and Sequences

  KH2012:KH.C9.751.v1.B.ND1-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000020636
ENSEMBL ENSCING00000020726
NCBI Reference Sequence XM_018813150.1
Collections

Gateway full ORF

1 result

cima889632

Plate: VES70_C14

Gene collection 1 (N. Satoh)

1 result

citb017d18

Plate: R1CiGC31c07

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
Ig-like_dom ProSiteProfiles Immunoglobulin-like domain
Prot_kinase_dom ProSiteProfiles Protein kinase domain
Prot_kinase_dom Pfam Protein kinase domain
Ig-like_fold Gene3D Immunoglobulin-like fold
Ig_I-set Pfam Immunoglobulin I-set
Kinase-like_dom_sf SUPERFAMILY Protein kinase-like domain superfamily
Ig_sub SMART Immunoglobulin subtype
Ig_sub2 SMART Immunoglobulin subtype 2
Ig-like_dom_sf SUPERFAMILY Immunoglobulin-like domain superfamily

GOSlim

23 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
protein kinase activity Blast molecular function
protein serine/threonine kinase activity Blast molecular function
protein binding Blast molecular function
calmodulin binding Blast molecular function
ATP binding Blast molecular function
nucleus Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
protein phosphorylation InterProScan biological process
membrane Blast cellular component
kinase activity Blast molecular function
nuclear body Blast cellular component
transferase activity Blast molecular function
metal ion binding Blast molecular function
enzyme binding Blast molecular function
molecular function regulator Blast molecular function
structural molecule activity Blast molecular function
cytoplasmic part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
organelle part Blast cellular component
cytoskeletal protein binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 282 6.86e-81
protein kinase activity Hs molecular function 282 6.86e-81
protein serine/threonine kinase activity Hs molecular function 282 6.86e-81
guanyl-nucleotide exchange factor activity Hs molecular function 265 6.17e-75
Rho guanyl-nucleotide exchange factor activity Hs molecular function 265 6.17e-75
protein binding Hs molecular function 282 6.86e-81
calmodulin binding Hs molecular function 265 6.17e-75
ATP binding Hs molecular function 282 6.86e-81
nucleus Hs cellular component 282 6.86e-81
cytoplasm Hs cellular component 265 6.17e-75
cytosol Hs cellular component 265 6.17e-75
plasma membrane Hs cellular component 265 6.17e-75
structural constituent of muscle Hs molecular function 265 6.17e-75
membrane Hs cellular component 265 6.17e-75
kinase activity Hs molecular function 282 6.86e-81
nuclear body Hs cellular component 265 6.17e-75
transferase activity Hs molecular function 282 6.86e-81
myofibril Hs cellular component 265 6.17e-75
sarcomere Hs cellular component 265 6.17e-75
Z disc Hs cellular component 265 6.17e-75
ankyrin binding Hs molecular function 265 6.17e-75
M band Hs cellular component 265 6.17e-75
titin binding Hs molecular function 265 6.17e-75
sarcolemma Hs cellular component 265 6.17e-75
metal ion binding Hs molecular function 265 6.17e-75

GO (InterProScan)

3 results

GO Term Analysis Type e-value
protein kinase activity Pfam molecular function 3.4E-63
ATP binding Pfam molecular function 3.4E-63
protein phosphorylation Pfam biological process 3.4E-63

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