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Gene Card

Best human hits

PAFAH1B1; WDR5; WDR5B

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010202

Gene Model ID

KH2012:KH.C9.636

Location

KhC9:180717..184284

Transcript Models and Sequences

  KH2012:KH.C9.636.v1.A.ND2-1
KH2012:KH.C9.636.v1.A.SL1-1
KH2012:KH.C9.636.v1.A.SL3-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000006958
NCBI Reference Sequence XM_002127664.1
Collections

Gateway full ORF

2 results

cima879543

Plate: VES68_F15

cien180170

Plate: VES98_E02

Gene collection 1 (N. Satoh)

2 results

cicl021a16

Plate: R1CiGC11k13

cilv039l22

Plate: R1CiGC28c14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site
WD40_repeat ProSiteProfiles WD40 repeat
WDR5 PANTHER WD repeat-containing protein 5
WD40_repeat SMART WD40 repeat
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
G-protein_beta_WD-40_rep PRINTS G-protein beta WD-40 repeat
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat Pfam WD40 repeat

GOSlim

44 results

GO Term Annotation Origin Type
protein binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
nuclear envelope Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
centrosome Blast cellular component
microtubule organizing center Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
microtubule Blast cellular component
microtubule binding Blast molecular function
microtubule cytoskeleton Blast cellular component
membrane Blast cellular component
axon Blast cellular component
cell leading edge Blast cellular component
nuclear membrane Blast cellular component
vesicle Blast cellular component
protein homodimerization activity Blast molecular function
neuron projection Blast cellular component
neuronal cell body Blast cellular component
perinuclear region of cytoplasm Blast cellular component
extracellular exosome Blast cellular component
nucleoplasm part Blast cellular component
macromolecular complex Blast cellular component
cytoplasmic part Blast cellular component
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
hydrolase activity Blast molecular function
cytoskeletal part Blast cellular component
cell periphery Blast cellular component
anion binding Blast molecular function
carbohydrate derivative binding Blast molecular function
organelle organization Blast biological process
transferase activity Blast molecular function
cellular protein modification process Blast biological process
cell projection part Blast cellular component
organelle Blast cellular component
cell projection Blast cellular component
plasma membrane region Blast cellular component
cluster of actin-based cell projections Blast cellular component
cytoskeletal protein binding Blast molecular function
enzyme binding Blast molecular function
macromolecular complex binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

54 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
histone acetyltransferase complex Hs cellular component 594 0.0
astral microtubule Hs cellular component 178 2.52e-52
kinetochore Hs cellular component 178 2.52e-52
phospholipase A2 activity Hs molecular function 178 2.52e-52
protein binding Hs molecular function 594 0.0
intracellular Hs cellular component 594 0.0
nucleus Hs cellular component 594 0.0
nuclear envelope Hs cellular component 178 2.52e-52
nucleoplasm Hs cellular component 594 0.0
Ada2/Gcn5/Ada3 transcription activator complex Hs cellular component 594 0.0
cytoplasm Hs cellular component 178 2.52e-52
centrosome Hs cellular component 178 2.52e-52
microtubule organizing center Hs cellular component 178 2.52e-52
spindle Hs cellular component 178 2.52e-52
cytosol Hs cellular component 178 2.52e-52
cytoskeleton Hs cellular component 178 2.52e-52
kinesin complex Hs cellular component 178 2.52e-52
microtubule Hs cellular component 178 2.52e-52
microtubule associated complex Hs cellular component 178 2.52e-52
cell cortex Hs cellular component 178 2.52e-52
microtubule binding Hs molecular function 178 2.52e-52
heparin binding Hs molecular function 178 2.52e-52
microtubule cytoskeleton Hs cellular component 178 2.52e-52
membrane Hs cellular component 178 2.52e-52
histone-lysine N-methyltransferase activity Hs molecular function 594 0.0
axon Hs cellular component 178 2.52e-52
growth cone Hs cellular component 178 2.52e-52
cell leading edge Hs cellular component 178 2.52e-52
motile cilium Hs cellular component 178 2.52e-52
nuclear membrane Hs cellular component 178 2.52e-52
vesicle Hs cellular component 178 2.52e-52
stereocilium Hs cellular component 178 2.52e-52
dynactin binding Hs molecular function 178 2.52e-52
methylated histone binding Hs molecular function 594 0.0
histone methyltransferase complex Hs cellular component 594 0.0
ciliary basal body Hs cellular component 594 0.0
histone methyltransferase activity (H3-K4 specific) Hs molecular function 594 0.0
protein homodimerization activity Hs molecular function 178 2.52e-52
neuron projection Hs cellular component 178 2.52e-52
neuronal cell body Hs cellular component 178 2.52e-52
phospholipase binding Hs molecular function 178 2.52e-52
histone acetyltransferase activity (H4-K5 specific) Hs molecular function 594 0.0
histone acetyltransferase activity (H4-K8 specific) Hs molecular function 594 0.0
MLL3/4 complex Hs cellular component 594 0.0
dynein intermediate chain binding Hs molecular function 178 2.52e-52
histone acetyltransferase activity (H4-K16 specific) Hs molecular function 594 0.0
Set1C/COMPASS complex Hs cellular component 594 0.0
perinuclear region of cytoplasm Hs cellular component 178 2.52e-52
phosphoprotein binding Hs molecular function 178 2.52e-52
extracellular exosome Hs cellular component 178 2.52e-52
dynein complex binding Hs molecular function 178 2.52e-52
MLL1 complex Hs cellular component 594 0.0
central region of growth cone Hs cellular component 178 2.52e-52
axon cytoplasm Hs cellular component 178 2.52e-52

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Gene3D molecular function 7.1E-149

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