Aniseed - Gene card

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000008274
ENSEMBL	ENSCING00000023817
NCBI Reference Sequence	XM_018813326.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

citb017i08

Plate: R1CiGC31c17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Actin	SMART	Actin family
Actin	Pfam	Actin family
Actin	PANTHER	Actin family
Arp3	PANTHER	Actin-related protein 3

GOSlim

36 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
actin binding	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
extracellular space	Blast	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Orthology	cellular component
brush border	Orthology	cellular component
focal adhesion	Orthology	cellular component
membrane	Orthology	cellular component
lamellipodium	Orthology	cellular component
cell projection organization	Orthology	biological process
cell projection	Orthology	cellular component
cell body	Blast	cellular component
actin filament binding	Orthology	molecular function
membrane organization	Orthology	biological process
extracellular exosome	Orthology	cellular component
organelle organization	Orthology	biological process
structural molecule activity	Orthology	molecular function
cytoskeletal part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cell junction	Orthology	cellular component
cellular process	Orthology	biological process
cell division	Orthology	biological process
reproductive process	Orthology	biological process
microtubule-based movement	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
innate immune response	Orthology	biological process
cytoplasmic part	Blast	cellular component
cytoskeletal protein binding	Blast	molecular function
organelle part	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
plasma membrane region	Blast	cellular component
anion binding	Blast	molecular function
adenyl ribonucleotide binding	Blast	molecular function

GO (Orthology)

31 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
actin binding	Hs	molecular function
structural constituent of cytoskeleton	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
cytoskeleton	Hs	cellular component
Arp2/3 protein complex	Hs	cellular component
brush border	Hs	cellular component
cell-cell junction	Hs	cellular component
focal adhesion	Hs	cellular component
actin filament organization	Hs	biological process
establishment or maintenance of cell polarity	Hs	biological process
asymmetric cell division	Hs	biological process
actin cytoskeleton	Hs	cellular component
membrane	Hs	cellular component
meiotic chromosome movement towards spindle pole	Hs	biological process
lamellipodium	Hs	cellular component
cell projection organization	Hs	biological process
meiotic cytokinesis	Hs	biological process
Arp2/3 complex-mediated actin nucleation	Hs	biological process
cell projection	Hs	cellular component
ephrin receptor signaling pathway	Hs	biological process
actin filament binding	Hs	molecular function
meiotic cell cycle	Hs	biological process
spindle localization	Hs	biological process
cilium assembly	Hs	biological process
membrane organization	Hs	biological process
extracellular exosome	Hs	cellular component
cellular response to interferon-gamma	Hs	biological process

GO (Blast)

28 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	306	6.19e-103
stress fiber	Hs	cellular component	95.5	2.01e-22
actin binding	Hs	molecular function	306	6.19e-103
structural constituent of cytoskeleton	Hs	molecular function	306	6.19e-103
protein binding	Hs	molecular function	306	6.19e-103
ATP binding	Hs	molecular function	306	6.19e-103
extracellular space	Hs	cellular component	95.5	2.01e-22
cytoplasm	Hs	cellular component	306	6.19e-103
cytosol	Hs	cellular component	306	6.19e-103
cytoskeleton	Hs	cellular component	306	6.19e-103
striated muscle thin filament	Hs	cellular component	95.5	2.01e-22
actin filament	Hs	cellular component	95.5	2.01e-22
Arp2/3 protein complex	Hs	cellular component	306	6.19e-103
brush border	Hs	cellular component	306	6.19e-103
cell-cell junction	Hs	cellular component	306	6.19e-103
focal adhesion	Hs	cellular component	306	6.19e-103
actin cytoskeleton	Hs	cellular component	306	6.19e-103
membrane	Hs	cellular component	306	6.19e-103
myosin binding	Hs	molecular function	95.5	2.01e-22
sarcomere	Hs	cellular component	95.5	2.01e-22
lamellipodium	Hs	cellular component	306	6.19e-103
filopodium	Hs	cellular component	95.5	2.01e-22
cell projection	Hs	cellular component	306	6.19e-103
ADP binding	Hs	molecular function	95.5	2.01e-22
cell body	Hs	cellular component	95.5	2.01e-22
actin filament binding	Hs	molecular function	306	6.19e-103
extracellular exosome	Hs	cellular component	306	6.19e-103
blood microparticle	Hs	cellular component	95.5	2.01e-22

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
ATP binding	PANTHER	molecular function	1.8E-142
Arp2/3 protein complex	PANTHER	cellular component	1.8E-142
actin filament organization	PANTHER	biological process	1.8E-142
Arp2/3 complex-mediated actin nucleation	PANTHER	biological process	1.8E-142

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences