Aniseed - Gene card

Gene Card

Best human hits

PRDX1; PRDX2; PRDX6

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009864

Gene Model ID

KH2012:KH.C9.33

Location

KhC9:5377058..5379535

Transcript Models and Sequences

KH2012:KH.C9.33.v1.A.ND1-1
KH2012:KH.C9.33.v1.A.nonSL5-1
KH2012:KH.C9.33.v1.A.SL2-1
KH2012:KH.C9.33.v1.A.SL4-1
KH2012:KH.C9.33.v2.A.ND1-1
KH2012:KH.C9.33.v2.A.nonSL5-1
KH2012:KH.C9.33.v2.A.SL2-1
KH2012:KH.C9.33.v2.A.SL4-1
KH2012:KH.C9.33.v3.R.ND3-1
KH2012:KH.C9.33.v4.A.nonSL5-1
KH2012:KH.C9.33.v4.A.SL2-1
KH2012:KH.C9.33.v4.A.SL4-1

External Database Gene Card

External database links

2 results

Database	Gene ID
NCBI Reference Sequence	XM_002127150.4
NCBI Reference Sequence	XM_009861445.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad058p10

Plate: R1CiGC06g03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Thioredoxin-like_sf	SUPERFAMILY	Thioredoxin-like superfamily
AhpC/TSA	Pfam	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
Thioredoxin_domain	ProSiteProfiles	Thioredoxin domain
Peroxiredoxin_AhpC-typ	PIRSF	Peroxiredoxin, AhpC-type
Peroxiredoxin_C	Pfam	Peroxiredoxin, C-terminal

GOSlim

33 results

GO Term	Annotation Origin	Type
RNA binding	Blast	molecular function
catalytic activity	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
extracellular space	Orthology	cellular component
cell	Orthology	cellular component
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Blast	cellular component
lysosome	Orthology	cellular component
cytosol	Orthology	cellular component
response to oxidative stress	Orthology	biological process
metabolic process	Orthology	biological process
membrane	Orthology	cellular component
hydrolase activity	Orthology	molecular function
ubiquitin protein ligase binding	Orthology	molecular function
melanosome	Blast	cellular component
identical protein binding	Blast	molecular function
protein homodimerization activity	Orthology	molecular function
myelin sheath	Blast	cellular component
perinuclear region of cytoplasm	Orthology	cellular component
oxidation-reduction process	Orthology	biological process
extracellular exosome	Orthology	cellular component
organic substance metabolic process	Orthology	biological process
cellular response to stress	Orthology	biological process
cytoplasmic vesicle	Orthology	cellular component
vacuolar part	Orthology	cellular component
endomembrane system	Orthology	cellular component
intracellular organelle lumen	Orthology	cellular component
cell adhesion molecule binding	Orthology	molecular function
phosphate-containing compound metabolic process	Orthology	biological process
mRNA splicing, via spliceosome	Orthology	biological process
positive regulation of gene expression	Orthology	biological process

GO (Orthology)

37 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
catalytic activity	Hs	molecular function
peroxidase activity	Hs	molecular function
glutathione peroxidase activity	Hs	molecular function
phospholipase A2 activity	Hs	molecular function
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
extracellular space	Hs	cellular component
cell	Hs	cellular component
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
lysosome	Hs	cellular component
cytosol	Hs	cellular component
lipid metabolic process	Hs	biological process
response to oxidative stress	Hs	biological process
metabolic process	Hs	biological process
membrane	Hs	cellular component
lipid catabolic process	Hs	biological process
antioxidant activity	Hs	molecular function
oxidoreductase activity	Hs	molecular function
hydrolase activity	Hs	molecular function
ubiquitin protein ligase binding	Hs	molecular function
cellular response to oxidative stress	Hs	biological process
azurophil granule lumen	Hs	cellular component
hydrogen peroxide catabolic process	Hs	biological process
protein homodimerization activity	Hs	molecular function
cadherin binding	Hs	molecular function
cell redox homeostasis	Hs	biological process
glycerophospholipid catabolic process	Hs	biological process
calcium-independent phospholipase A2 activity	Hs	molecular function
positive regulation of mRNA splicing, via spliceosome	Hs	biological process
perinuclear region of cytoplasm	Hs	cellular component
peroxiredoxin activity	Hs	molecular function
oxidation-reduction process	Hs	biological process
extracellular exosome	Hs	cellular component
cellular oxidant detoxification	Hs	biological process
phospholipase A2 activity (consuming 1,2-dipalmitoylphosphatidylcholine)	Hs	molecular function
phospholipase A2 activity consuming 1,2-dioleoylphosphatidylethanolamine)	Hs	molecular function

GO (Blast)

32 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	74.7	1.57e-16
catalytic activity	Hs	molecular function	262	2.83e-89
peroxidase activity	Hs	molecular function	262	2.83e-89
glutathione peroxidase activity	Hs	molecular function	262	2.83e-89
phospholipase A2 activity	Hs	molecular function	262	2.83e-89
protein binding	Hs	molecular function	262	2.83e-89
extracellular region	Hs	cellular component	262	2.83e-89
extracellular space	Hs	cellular component	262	2.83e-89
cell	Hs	cellular component	262	2.83e-89
nucleus	Hs	cellular component	262	2.83e-89
cytoplasm	Hs	cellular component	262	2.83e-89
mitochondrion	Hs	cellular component	74.7	1.57e-16
lysosome	Hs	cellular component	262	2.83e-89
cytosol	Hs	cellular component	262	2.83e-89
thioredoxin peroxidase activity	Hs	molecular function	80.1	1.51e-18
membrane	Hs	cellular component	262	2.83e-89
antioxidant activity	Hs	molecular function	262	2.83e-89
oxidoreductase activity	Hs	molecular function	262	2.83e-89
hydrolase activity	Hs	molecular function	262	2.83e-89
ubiquitin protein ligase binding	Hs	molecular function	262	2.83e-89
azurophil granule lumen	Hs	cellular component	262	2.83e-89
melanosome	Hs	cellular component	74.7	1.57e-16
identical protein binding	Hs	molecular function	74.7	1.57e-16
protein homodimerization activity	Hs	molecular function	262	2.83e-89
myelin sheath	Hs	cellular component	74.7	1.57e-16
cadherin binding	Hs	molecular function	262	2.83e-89
calcium-independent phospholipase A2 activity	Hs	molecular function	262	2.83e-89
perinuclear region of cytoplasm	Hs	cellular component	262	2.83e-89
peroxiredoxin activity	Hs	molecular function	262	2.83e-89
extracellular exosome	Hs	cellular component	262	2.83e-89
phospholipase A2 activity (consuming 1,2-dipalmitoylphosphatidylcholine)	Hs	molecular function	262	2.83e-89
phospholipase A2 activity consuming 1,2-dioleoylphosphatidylethanolamine)	Hs	molecular function	262	2.83e-89

GO (InterProScan)