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GENE CARD

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Gene Card

Best human hits

TOP2A; TOP2B

Unique Gene ID

Cirobu.g00009792

Gene Model ID

KH2012:KH.C9.262

Location

KhC9:4534665..4549311

External Database Gene Card
Collections

Gateway full ORF

2 results

cien73545

Plate: VES81_O20

cien86482

Plate: VES83_N21

Gene collection 1 (N. Satoh)

5 results

cicl001e13

Plate: R1CiGC08m13

cieg006b17

Plate: R1CiGC16g20

cicl010j04

Plate: R1CiGC09j09

cieg056k08

Plate: R1CiGC24j09

citb066b10

Plate: R1CiGC46k03

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

22 results

IPR Term Analysis Definition
HATPase_C_sf Gene3D Histidine kinase/HSP90-like ATPase superfamily
Topo_IIA_A/C SMART DNA topoisomerase, type IIA, subunit A/C-terminal
HATPase_C CDD Histidine kinase/HSP90-like ATPase
Topo_IIA-like_dom_sf SUPERFAMILY DNA topoisomerase, type IIA-like domain superfamily
TOPRIM_domain ProSiteProfiles TOPRIM domain
TopoIIA_CS ProSitePatterns DNA topoisomerase, type IIA, conserved site
TopoII_euk PRINTS DNA topoisomerase II, eukaryotic-type
HATPase_C SMART Histidine kinase/HSP90-like ATPase
Topo_IIA SMART DNA topoisomerase, type IIA
HATPase_C_sf SUPERFAMILY Histidine kinase/HSP90-like ATPase superfamily
TOPRIM_C Pfam C-terminal associated domain of TOPRIM
Topo_IIA_A/C Pfam DNA topoisomerase, type IIA, subunit A/C-terminal
Topo_IIA PANTHER DNA topoisomerase, type IIA
TOPRIM_domain Pfam TOPRIM domain
Topo_IIA_bsu_dom2 Pfam DNA topoisomerase, type IIA, subunit B, domain 2
Ribosomal_S5_D2-typ_fold_subgr Gene3D Ribosomal protein S5 domain 2-type fold, subgroup
HATPase_C Pfam Histidine kinase/HSP90-like ATPase
Topo_IIA_A/C_ab Gene3D DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta
Topo_IIA_B_C Gene3D DNA topoisomerase, type IIA, subunit B, C-terminal
Ribosomal_S5_D2-typ_fold SUPERFAMILY Ribosomal protein S5 domain 2-type fold
Topo_IIA_A_a_sf Gene3D Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily
TOPRIM_TopoII CDD DNA topoisomerase 2, TOPRIM domain

GOSlim

46 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
magnesium ion binding Orthology molecular function
DNA binding Orthology molecular function
chromatin binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
nucleolus Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
DNA metabolic process Orthology biological process
cellular response to DNA damage stimulus Orthology biological process
axonogenesis Orthology biological process
protein C-terminus binding Orthology molecular function
enzyme binding Orthology molecular function
macromolecular complex Orthology cellular component
protein homodimerization activity Orthology molecular function
positive regulation of apoptotic process Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
metal ion binding Orthology molecular function
protein heterodimerization activity Orthology molecular function
intracellular non-membrane-bounded organelle Orthology cellular component
nuclear lumen Orthology cellular component
reproductive process Orthology biological process
intracellular organelle part Orthology cellular component
organelle organization Orthology biological process
cell migration Orthology biological process
generation of neurons Orthology biological process
animal organ development Orthology biological process
immune system process Orthology biological process
cell differentiation Orthology biological process
catalytic activity Orthology molecular function
nucleoside-triphosphatase activity Orthology molecular function
protein kinase binding Orthology molecular function
cytoplasmic part Orthology cellular component
microtubule organizing center Orthology cellular component
cellular process Orthology biological process
binding Orthology molecular function
intracellular part Orthology cellular component
protein modification by small protein conjugation Orthology biological process
brain development Orthology biological process
cell division Orthology biological process
multicellular organism development Orthology biological process
macromolecular complex binding Orthology molecular function

GO (Orthology)

54 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
nuclear chromosome Hs cellular component
magnesium ion binding Hs molecular function
resolution of meiotic recombination intermediates Hs biological process
heterochromatin Hs cellular component
condensed chromosome Hs cellular component
sister chromatid segregation Hs biological process
neuron migration Hs biological process
hematopoietic progenitor cell differentiation Hs biological process
DNA binding Hs molecular function
chromatin binding Hs molecular function
RNA binding Hs molecular function
DNA topoisomerase activity Hs molecular function
DNA topoisomerase type II (ATP-hydrolyzing) activity Hs molecular function
protein kinase C binding Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
centriole Hs cellular component
cytosol Hs cellular component
DNA metabolic process Hs biological process
DNA topological change Hs biological process
DNA ligation Hs biological process
cellular response to DNA damage stimulus Hs biological process
chromosome segregation Hs biological process
axonogenesis Hs biological process
protein C-terminus binding Hs molecular function
DNA-dependent ATPase activity Hs molecular function
drug binding Hs molecular function
DNA binding, bending Hs molecular function
DNA topoisomerase complex (ATP-hydrolyzing) Hs cellular component
isomerase activity Hs molecular function
protein sumoylation Hs biological process
viral integration complex Hs cellular component
enzyme binding Hs molecular function
chromosome condensation Hs biological process
intracellular ribonucleoprotein complex Hs cellular component
forebrain development Hs biological process
macromolecular complex Hs cellular component
embryonic cleavage Hs biological process
regulation of circadian rhythm Hs biological process
protein homodimerization activity Hs molecular function
histone deacetylase binding Hs molecular function
ribonucleoprotein complex binding Hs molecular function
positive regulation of apoptotic process Hs biological process
ubiquitin binding Hs molecular function
mitotic DNA integrity checkpoint Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function
protein heterodimerization activity Hs molecular function
rhythmic process Hs biological process

GO (Blast)

35 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 1688 0.0
nuclear chromosome Hs cellular component 1686 0.0
magnesium ion binding Hs molecular function 1686 0.0
heterochromatin Hs cellular component 1688 0.0
condensed chromosome Hs cellular component 1686 0.0
DNA binding Hs molecular function 1688 0.0
chromatin binding Hs molecular function 1688 0.0
RNA binding Hs molecular function 1686 0.0
DNA topoisomerase activity Hs molecular function 1688 0.0
DNA topoisomerase type II (ATP-hydrolyzing) activity Hs molecular function 1688 0.0
protein kinase C binding Hs molecular function 1688 0.0
protein binding Hs molecular function 1686 0.0
ATP binding Hs molecular function 1688 0.0
nucleus Hs cellular component 1688 0.0
nucleoplasm Hs cellular component 1688 0.0
nucleolus Hs cellular component 1686 0.0
cytoplasm Hs cellular component 1688 0.0
centriole Hs cellular component 1686 0.0
cytosol Hs cellular component 1688 0.0
protein C-terminus binding Hs molecular function 1688 0.0
DNA-dependent ATPase activity Hs molecular function 1686 0.0
drug binding Hs molecular function 1686 0.0
DNA binding, bending Hs molecular function 1686 0.0
DNA topoisomerase complex (ATP-hydrolyzing) Hs cellular component 1686 0.0
isomerase activity Hs molecular function 1688 0.0
viral integration complex Hs cellular component 1686 0.0
enzyme binding Hs molecular function 1688 0.0
intracellular ribonucleoprotein complex Hs cellular component 1688 0.0
macromolecular complex Hs cellular component 1686 0.0
protein homodimerization activity Hs molecular function 1686 0.0
histone deacetylase binding Hs molecular function 1688 0.0
ribonucleoprotein complex binding Hs molecular function 1688 0.0
ubiquitin binding Hs molecular function 1686 0.0
metal ion binding Hs molecular function 1688 0.0
protein heterodimerization activity Hs molecular function 1688 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
DNA binding PANTHER molecular function 0.0
DNA topoisomerase type II (ATP-hydrolyzing) activity PANTHER molecular function 0.0
ATP binding PANTHER molecular function 0.0
DNA metabolic process Gene3D biological process 8.1E-189
DNA topological change PANTHER biological process 0.0