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Gene Card

Best human hits

RAC1; RAC2; RAC3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009749

Gene Model ID

KH2012:KH.C9.223

Location

KhC9:4164557..4166401

Transcript Models and Sequences

  KH2012:KH.C9.223.v1.A.ND1-1
KH2012:KH.C9.223.v1.A.SL2-1
KH2012:KH.C9.223.v1.A.SL3-1
KH2012:KH.C9.223.v1.A.SL4-1
KH2012:KH.C9.223.v1.A.SL5-1
KH2012:KH.C9.223.v1.A.SL6-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000002330
NCBI Reference Sequence NM_001032615.1
Collections

Gateway full ORF

3 results

cima821742

Plate: VES60_N05

cima870497

Plate: VES66_O15

cien155374

Plate: VES94_C09

Gene collection 1 (N. Satoh)

1 result

cilv007d18

Plate: R1CiGC25f09

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Small_GTPase Pfam Small GTPase superfamily
Small_GTPase_Rho ProSiteProfiles Small GTPase superfamily, Rho type
Small_GTP-bd_dom TIGRFAM Small GTP-binding protein domain

GOSlim

45 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
nucleotide binding Blast molecular function
GTPase activity Blast molecular function
protein serine/threonine kinase activity Blast molecular function
protein binding Blast molecular function
GTP binding Blast molecular function
intracellular Blast cellular component
nuclear envelope Blast cellular component
cytoplasm Blast cellular component
endoplasmic reticulum membrane Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
focal adhesion Blast cellular component
small GTPase mediated signal transduction InterProScan biological process
endomembrane system Blast cellular component
membrane Blast cellular component
enzyme binding Blast molecular function
protein kinase binding Blast molecular function
lamellipodium Blast cellular component
cytoplasmic vesicle Blast cellular component
melanosome Blast cellular component
cell projection Blast cellular component
neuron projection Blast cellular component
neuronal cell body Blast cellular component
perinuclear region of cytoplasm Blast cellular component
extracellular exosome Blast cellular component
cell periphery Blast cellular component
Golgi apparatus part Blast cellular component
cytoskeletal part Blast cellular component
protein kinase activity Blast molecular function
regulation of cellular metabolic process Blast biological process
enzyme regulator activity Blast molecular function
cell projection part Blast cellular component
axon Blast cellular component
intracellular organelle part Blast cellular component
whole membrane Blast cellular component
bounding membrane of organelle Blast cellular component
macromolecular complex Blast cellular component
cell projection membrane Blast cellular component
cell leading edge Blast cellular component
cytoplasmic part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
postsynapse Blast cellular component
endosome Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

45 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
Golgi membrane Hs cellular component 322 7.76e-114
nucleotide binding Hs molecular function 330 3.87e-117
GTPase activity Hs molecular function 330 3.87e-117
protein serine/threonine kinase activity Hs molecular function 322 7.76e-114
protein binding Hs molecular function 330 3.87e-117
GTP binding Hs molecular function 330 3.87e-117
intracellular Hs cellular component 330 3.87e-117
nuclear envelope Hs cellular component 330 3.87e-117
cytoplasm Hs cellular component 330 3.87e-117
endoplasmic reticulum membrane Hs cellular component 322 7.76e-114
trans-Golgi network Hs cellular component 322 7.76e-114
cytosol Hs cellular component 330 3.87e-117
cytoskeleton Hs cellular component 326 9.93e-116
actin filament Hs cellular component 330 3.87e-117
plasma membrane Hs cellular component 330 3.87e-117
focal adhesion Hs cellular component 330 3.87e-117
endomembrane system Hs cellular component 326 9.93e-116
membrane Hs cellular component 330 3.87e-117
Rab GTPase binding Hs molecular function 322 7.76e-114
protein kinase regulator activity Hs molecular function 330 3.87e-117
enzyme binding Hs molecular function 322 7.76e-114
protein kinase binding Hs molecular function 322 7.76e-114
lamellipodium Hs cellular component 330 3.87e-117
growth cone Hs cellular component 326 9.93e-116
secretory granule membrane Hs cellular component 322 7.76e-114
phagocytic vesicle membrane Hs cellular component 330 3.87e-117
cytoplasmic vesicle Hs cellular component 322 7.76e-114
filamentous actin Hs cellular component 326 9.93e-116
thioesterase binding Hs molecular function 322 7.76e-114
ruffle membrane Hs cellular component 322 7.76e-114
cytoplasmic ribonucleoprotein granule Hs cellular component 322 7.76e-114
melanosome Hs cellular component 322 7.76e-114
histone deacetylase binding Hs molecular function 322 7.76e-114
cell projection Hs cellular component 326 9.93e-116
neuron projection Hs cellular component 326 9.93e-116
neuronal cell body Hs cellular component 326 9.93e-116
dendritic spine Hs cellular component 322 7.76e-114
calcium-dependent protein binding Hs molecular function 326 9.93e-116
perinuclear region of cytoplasm Hs cellular component 326 9.93e-116
Rho GDP-dissociation inhibitor binding Hs molecular function 322 7.76e-114
ATPase binding Hs molecular function 322 7.76e-114
recycling endosome membrane Hs cellular component 322 7.76e-114
extracellular exosome Hs cellular component 330 3.87e-117
cell periphery Hs cellular component 326 9.93e-116
ficolin-1-rich granule membrane Hs cellular component 322 7.76e-114

GO (InterProScan)

4 results

GO Term Analysis Type e-value
GTPase activity Pfam molecular function 4.9E-55
GTP binding Pfam molecular function 4.9E-55
intracellular ProSiteProfiles cellular component 28.724
small GTPase mediated signal transduction ProSiteProfiles biological process 28.724

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