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GENE CARD

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Gene Card

Best human hits

MYL2; MYL5; MYL7

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009534

Gene Model ID

KH2012:KH.C8.859

Location

KhC8:4020684..4022432

Transcript Models and Sequences

  KH2012:KH.C8.859.v1.A.nonSL1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000002749
NCBI Reference Sequence XM_009861042.2
Collections

Gateway full ORF

1 result

cien74931

Plate: VES82_C04

Gene collection 1 (N. Satoh)

1 result

cilv001j06

Plate: R1CiGC24p06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
EF-hand-dom_pair SUPERFAMILY EF-hand domain pair
EF_hand_dom ProSiteProfiles EF-hand domain
EF_hand_dom SMART EF-hand domain
EF_Hand_1_Ca_BS ProSitePatterns EF-Hand 1, calcium-binding site

GOSlim

26 results

GO Term Annotation Origin Type
calcium ion binding Orthology molecular function
protein binding Orthology molecular function
cytoplasm Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
heart development Orthology biological process
metal ion binding Orthology molecular function
mitochondrion Orthology cellular component
lysosomal membrane Orthology cellular component
immune response Orthology biological process
anatomical structure morphogenesis Orthology biological process
actin binding Orthology molecular function
cytoplasmic part Orthology cellular component
cytoskeletal part Orthology cellular component
macromolecular complex Orthology cellular component
structural molecule activity Orthology molecular function
multicellular organism development Orthology biological process
intracellular non-membrane-bounded organelle Orthology cellular component
organelle part Orthology cellular component
cellular component organization Orthology biological process
cytoskeletal protein binding Orthology molecular function
anatomical structure development Orthology biological process
cell differentiation Orthology biological process
cell development Orthology biological process
animal organ development Orthology biological process
postsynapse Blast cellular component

GO (Orthology)

32 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
heart morphogenesis Hs biological process
actin monomer binding Hs molecular function
calcium ion binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
muscle myosin complex Hs cellular component
muscle contraction Hs biological process
regulation of striated muscle contraction Hs biological process
heart development Hs biological process
structural constituent of muscle Hs molecular function
post-embryonic development Hs biological process
actin cytoskeleton Hs cellular component
myosin complex Hs cellular component
myofibril Hs cellular component
sarcomere Hs cellular component
negative regulation of cell growth Hs biological process
A band Hs cellular component
myosin heavy chain binding Hs molecular function
muscle cell fate specification Hs biological process
metal ion binding Hs molecular function
muscle fiber development Hs biological process
cardiac myofibril assembly Hs biological process
ventricular cardiac muscle tissue morphogenesis Hs biological process
heart contraction Hs biological process
cardiac muscle contraction Hs biological process
cardiac myofibril Hs cellular component
mitochondrion Hs cellular component
lysosomal membrane Hs cellular component
immune response Hs biological process
skeletal muscle tissue development Hs biological process

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
actin monomer binding Hs molecular function 202 2.21e-67
calcium ion binding Hs molecular function 223 2.12e-75
protein binding Hs molecular function 202 2.21e-67
cytoplasm Hs cellular component 202 2.21e-67
cytosol Hs cellular component 223 2.12e-75
cytoskeleton Hs cellular component 202 2.21e-67
muscle myosin complex Hs cellular component 223 2.12e-75
structural constituent of muscle Hs molecular function 223 2.12e-75
actin cytoskeleton Hs cellular component 202 2.21e-67
myosin complex Hs cellular component 223 2.12e-75
myofibril Hs cellular component 202 2.21e-67
sarcomere Hs cellular component 202 2.21e-67
A band Hs cellular component 202 2.21e-67
myosin heavy chain binding Hs molecular function 202 2.21e-67
dendritic spine Hs cellular component 195 4.84e-64
metal ion binding Hs molecular function 223 2.12e-75
cardiac myofibril Hs cellular component 202 2.21e-67

GO (InterProScan)

1 result

GO Term Analysis Type e-value
calcium ion binding SMART molecular function 0.0032

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