- Gene 'KH2012:KH.L18.14' >
- Gene 'KH2012:KH.C8.847'
Gene Card
Best human hits
USP3; USP44; USP49
Unique Gene ID
Cirobu.g00009521
Gene Model ID
KH2012:KH.C8.847
Location
KhC8:1302648..1312243
Transcript Models and Sequences
External database links
3 results
Gene collection 1 (N. Satoh)
2 results
cicl049j23
Plate: R1CiGC13b22
cits040i16
Plate: R1CiGC35i05
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Znf_RING/FYVE/PHD | Gene3D | Zinc finger, RING/FYVE/PHD-type |
| USP_CS | ProSitePatterns | Ubiquitin specific protease, conserved site |
| USP_dom | ProSiteProfiles | Ubiquitin specific protease domain |
| Znf_UBP | ProSiteProfiles | Zinc finger, UBP-type |
| Peptidase_C19_UCH | Pfam | Peptidase C19, ubiquitin carboxyl-terminal hydrolase |
| Znf_UBP | SMART | Zinc finger, UBP-type |
| Znf_UBP | Pfam | Zinc finger, UBP-type |
GOSlim
17 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| proteolysis | InterProScan | biological process |
| peptidase activity | Blast | molecular function |
| zinc ion binding | Blast | molecular function |
| hydrolase activity | Blast | molecular function |
| metal ion binding | Blast | molecular function |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| nuclear lumen | Blast | cellular component |
| endopeptidase activity | Blast | molecular function |
| peptidase activity, acting on L-amino acid peptides | Blast | molecular function |
| cytoplasmic part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| midbody | Blast | cellular component |
| chromatin binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nuclear chromatin | Hs | cellular component | 175 | 1.54e-46 |
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Hs | molecular function | 175 | 1.54e-46 |
| cysteine-type endopeptidase activity | Hs | molecular function | 393 | 4.90e-124 |
| thiol-dependent ubiquitin-specific protease activity | Hs | molecular function | 393 | 4.90e-124 |
| protein binding | Hs | molecular function | 393 | 4.90e-124 |
| nucleus | Hs | cellular component | 393 | 4.90e-124 |
| nucleoplasm | Hs | cellular component | 393 | 4.90e-124 |
| peptidase activity | Hs | molecular function | 393 | 4.90e-124 |
| cysteine-type peptidase activity | Hs | molecular function | 393 | 4.90e-124 |
| zinc ion binding | Hs | molecular function | 393 | 4.90e-124 |
| hydrolase activity | Hs | molecular function | 393 | 4.90e-124 |
| thiol-dependent ubiquitinyl hydrolase activity | Hs | molecular function | 393 | 4.90e-124 |
| cytoplasmic ribonucleoprotein granule | Hs | cellular component | 175 | 1.54e-46 |
| histone binding | Hs | molecular function | 393 | 4.90e-124 |
| metal ion binding | Hs | molecular function | 393 | 4.90e-124 |
| Flemming body | Hs | cellular component | 175 | 1.54e-46 |
| promoter-specific chromatin binding | Hs | molecular function | 175 | 1.54e-46 |
GO (InterProScan)
4 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| ubiquitin-dependent protein catabolic process | ProSitePatterns | biological process | |
| zinc ion binding | Pfam | molecular function | 9.8E-19 |
| protein deubiquitination | Pfam | biological process | 2.5E-54 |
| thiol-dependent ubiquitinyl hydrolase activity | Pfam | molecular function | 2.5E-54 |
