Aniseed - Gene card

Gene 'KH2012:KH.C8.74'

Gene Card

Best human hits

KCMF1; RNF114; RNF138

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009403

Gene Model ID

KH2012:KH.C8.74

Location

KhC8:5302356..5311908

Transcript Models and Sequences

KH2012:KH.C8.74.v1.A.SL2-1
KH2012:KH.C8.74.v1.A.SL3-1
KH2012:KH.C8.74.v2.A.SL4-1
KH2012:KH.C8.74.v2.A.SL5-1
KH2012:KH.C8.74.v3.A.SL1-1

External Database Gene Card

External database links

1 result

Database	Gene ID
NCBI Reference Sequence	XM_009861081.2

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

2 results

cicl047m13

Plate: R1CiGC13b13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Znf_ZZ	ProSitePatterns	Zinc finger, ZZ-type
Znf_ZZ	Pfam	Zinc finger, ZZ-type
Znf_ZZ	SMART	Zinc finger, ZZ-type
Znf_ZZ	ProSiteProfiles	Zinc finger, ZZ-type
Di19_Zn_binding_dom	Pfam	Drought induced 19 protein type, zinc-binding domain

GOSlim

20 results

GO Term	Annotation Origin	Type
nucleic acid binding	Orthology	molecular function
DNA binding	Blast	molecular function
ubiquitin-protein transferase activity	Blast	molecular function
protein binding	Blast	molecular function
extracellular region	Orthology	cellular component
intracellular	Blast	cellular component
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Orthology	cellular component
plasma membrane	Blast	cellular component
zinc ion binding	Orthology	molecular function
transferase activity	Orthology	molecular function
protein kinase binding	Blast	molecular function
metal ion binding	Orthology	molecular function
intracellular organelle part	Orthology	cellular component
cytoplasmic vesicle	Orthology	cellular component
endomembrane system	Orthology	cellular component
intracellular organelle lumen	Orthology	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
enzyme binding	Blast	molecular function

GO (Orthology)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleic acid binding	Hs	molecular function
extracellular region	Hs	cellular component
cytosol	Hs	cellular component
zinc ion binding	Hs	molecular function
transferase activity	Hs	molecular function
metal ion binding	Hs	molecular function
ficolin-1-rich granule lumen	Hs	cellular component

GO (Blast)