Aniseed - Gene card

Gene 'KH2012:KH.C8.619'

Gene Card

Best human hits

DUSP12; RNF180

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009269

Gene Model ID

KH2012:KH.C8.619

Location

KhC8:5022355..5023449

Transcript Models and Sequences

KH2012:KH.C8.619.v1.A.nonSL10-1
KH2012:KH.C8.619.v1.A.nonSL11-1
KH2012:KH.C8.619.v1.A.nonSL12-1
KH2012:KH.C8.619.v1.A.nonSL13-1
KH2012:KH.C8.619.v1.A.nonSL15-1
KH2012:KH.C8.619.v1.A.nonSL16-1
KH2012:KH.C8.619.v1.A.nonSL2-1
KH2012:KH.C8.619.v1.A.nonSL3-1
KH2012:KH.C8.619.v1.A.nonSL5-1
KH2012:KH.C8.619.v1.A.nonSL6-1
KH2012:KH.C8.619.v1.A.nonSL7-1
KH2012:KH.C8.619.v1.A.nonSL8-1
KH2012:KH.C8.619.v1.A.nonSL9-1
KH2012:KH.C8.619.v1.A.SL4-1
KH2012:KH.C8.619.v1.R.ND1-1
KH2012:KH.C8.619.v2.A.SL14-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000013157

Collections

Gene collection 1 (N. Satoh)

1 result

cieg035i01

Plate: R1CiGC21o17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
RNF180	PANTHER	E3 ubiquitin-protein ligase RNF180

GOSlim

27 results

GO Term	Annotation Origin	Type
protein polyubiquitination	InterProScan	biological process
nucleic acid binding	Orthology	molecular function
protein binding	Orthology	molecular function
intracellular	Blast	cellular component
nucleus	Orthology	cellular component
nuclear envelope	Blast	cellular component
cytoplasm	Orthology	cellular component
endoplasmic reticulum	Blast	cellular component
endoplasmic reticulum membrane	Blast	cellular component
cytosol	Orthology	cellular component
cellular protein modification process	Orthology	biological process
protein dephosphorylation	Orthology	biological process
zinc ion binding	Orthology	molecular function
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
dephosphorylation	Orthology	biological process
transferase activity	Blast	molecular function
hydrolase activity	Orthology	molecular function
kinase binding	Orthology	molecular function
metal ion binding	Orthology	molecular function
positive regulation of catalytic activity	Orthology	biological process
organic substance metabolic process	Orthology	biological process
phosphotransferase activity, alcohol group as acceptor	Orthology	molecular function
kinase activity	Orthology	molecular function
intrinsic component of membrane	Blast	cellular component
enzyme binding	Blast	molecular function
ubiquitin-protein transferase activity	Blast	molecular function

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleic acid binding	Hs	molecular function
phosphoprotein phosphatase activity	Hs	molecular function
protein tyrosine phosphatase activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
cellular protein modification process	Hs	biological process
protein dephosphorylation	Hs	biological process
protein tyrosine/serine/threonine phosphatase activity	Hs	molecular function
zinc ion binding	Hs	molecular function
dephosphorylation	Hs	biological process
hydrolase activity	Hs	molecular function
phosphatase activity	Hs	molecular function
kinase binding	Hs	molecular function
positive regulation of glucokinase activity	Hs	biological process
peptidyl-tyrosine dephosphorylation	Hs	biological process
metal ion binding	Hs	molecular function

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleic acid binding	Hs	molecular function	47.0	7.38e-07
phosphoprotein phosphatase activity	Hs	molecular function	47.0	7.38e-07
protein tyrosine phosphatase activity	Hs	molecular function	47.0	7.38e-07
protein binding	Hs	molecular function	47.0	7.38e-07
intracellular	Hs	cellular component	72.8	9.50e-16
nucleus	Hs	cellular component	72.8	9.50e-16
nuclear envelope	Hs	cellular component	72.8	9.50e-16
cytoplasm	Hs	cellular component	47.0	7.38e-07
endoplasmic reticulum	Hs	cellular component	72.8	9.50e-16
endoplasmic reticulum membrane	Hs	cellular component	72.8	9.50e-16
cytosol	Hs	cellular component	47.0	7.38e-07
protein tyrosine/serine/threonine phosphatase activity	Hs	molecular function	47.0	7.38e-07
zinc ion binding	Hs	molecular function	47.0	7.38e-07
membrane	Hs	cellular component	72.8	9.50e-16
integral component of membrane	Hs	cellular component	72.8	9.50e-16
transferase activity	Hs	molecular function	72.8	9.50e-16
hydrolase activity	Hs	molecular function	47.0	7.38e-07
phosphatase activity	Hs	molecular function	47.0	7.38e-07
kinase binding	Hs	molecular function	47.0	7.38e-07
intrinsic component of endoplasmic reticulum membrane	Hs	cellular component	72.8	9.50e-16
ubiquitin conjugating enzyme binding	Hs	molecular function	72.8	9.50e-16
metal ion binding	Hs	molecular function	72.8	9.50e-16
ubiquitin protein ligase activity	Hs	molecular function	72.8	9.50e-16

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
protein polyubiquitination	PANTHER	biological process	5.8E-21
ubiquitin protein ligase activity	PANTHER	molecular function	5.8E-21