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GENE CARD

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  1. Gene 'KH2012:KH.C8.332'

Gene Card

Best human hits

KCNIP4

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008956

Gene Model ID

KH2012:KH.C8.332

Location

KhC8:4654144..4661116

Transcript Models and Sequences

  KH2012:KH.C8.332.v1.A.SL1-1
KH2012:KH.C8.332.v1.A.SL2-1
KH2012:KH.C8.332.v1.A.SL3-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000007501
NCBI Reference Sequence XM_002124832.4
Collections

Gateway full ORF

2 results

cima883022

Plate: VES69_B07

cima888957

Plate: VES70_P08

Gene collection 1 (N. Satoh)

1 result

citb5g7

Plate: R1CiGC29i16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
SPARC/Testican_Ca-bd-dom Pfam SPARC/Testican, calcium-binding domain
EF-hand-dom_pair SUPERFAMILY EF-hand domain pair
EF_hand_dom ProSiteProfiles EF-hand domain
EF_Hand_1_Ca_BS ProSitePatterns EF-Hand 1, calcium-binding site

GOSlim

16 results

GO Term Annotation Origin Type
calcium ion binding Blast molecular function
protein binding Blast molecular function
cytoplasm Blast cellular component
endoplasmic reticulum Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
ion transport Blast biological process
membrane Blast cellular component
metal ion binding Blast molecular function
signal transduction InterProScan biological process
transmembrane transport Blast biological process
metal ion transport Blast biological process
monovalent inorganic cation transport Blast biological process
integral component of plasma membrane Blast cellular component
macromolecular complex Blast cellular component
molecular function regulator Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
voltage-gated ion channel activity Hs molecular function 35.4 0.010
potassium channel activity Hs molecular function 35.4 0.010
calcium ion binding Hs molecular function 35.4 0.010
protein binding Hs molecular function 35.4 0.010
cytoplasm Hs cellular component 35.4 0.010
endoplasmic reticulum Hs cellular component 35.4 0.010
cytosol Hs cellular component 35.4 0.010
plasma membrane Hs cellular component 35.4 0.010
voltage-gated potassium channel complex Hs cellular component 35.4 0.010
potassium channel regulator activity Hs molecular function 35.4 0.010
membrane Hs cellular component 35.4 0.010
metal ion binding Hs molecular function 35.4 0.010

GO (InterProScan)

3 results

GO Term Analysis Type e-value
calcium ion binding Pfam molecular function 3.1E-5
proteinaceous extracellular matrix Pfam cellular component 3.1E-5
signal transduction Pfam biological process 3.1E-5

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