- Gene 'KH2012:KH.C7.99'
Gene Card
Best human hits
HOXB13; HOXC12; HOXD12
Unique Gene ID
Cirobu.g00008700
Gene Model ID
KH2012:KH.C7.99
Location
KhC7:2695878..2699953
Transcript Models and Sequences
KH2012:KH.C7.99.v1.A.nonSL3-1
KH2012:KH.C7.99.v1.A.SL2-1
KH2012:KH.C7.99.v2.A.ND1-1
External database links
1 result
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000019710 |
Gene collection 1 (N. Satoh)
1 result
cieg043n10
Plate: R1CiGC22h01
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
No Phylogeny Tree for this Gene.
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Homeobox_CS | ProSitePatterns | Homeobox, conserved site |
| Homeobox_dom | SMART | Homeobox domain |
| Homeobox_dom | Pfam | Homeobox domain |
| Homeobox_dom | ProSiteProfiles | Homeobox domain |
| Homeobox-like_sf | SUPERFAMILY | Homeobox-like domain superfamily |
| Homeobox_dom | CDD | Homeobox domain |
| Homeobox_metazoa | PRINTS | Homeobox domain, metazoa |
GOSlim
10 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| negative regulation of transcription from RNA polymerase II promoter | Blast | biological process |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| regulation of transcription, DNA-templated | InterProScan | biological process |
| sequence-specific DNA binding | Blast | molecular function |
| intracellular part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
8 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 85.9 | 5.00e-21 |
| transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding | Hs | molecular function | 82.0 | 1.74e-19 |
| DNA binding | Hs | molecular function | 85.9 | 5.00e-21 |
| protein binding | Hs | molecular function | 85.9 | 5.00e-21 |
| nucleus | Hs | cellular component | 85.9 | 5.00e-21 |
| nucleoplasm | Hs | cellular component | 82.0 | 1.74e-19 |
| transcription factor complex | Hs | cellular component | 85.9 | 5.00e-21 |
| sequence-specific DNA binding | Hs | molecular function | 85.9 | 5.00e-21 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| DNA binding | SMART | molecular function | 3.5E-21 |
| regulation of transcription, DNA-templated | ProSitePatterns | biological process | |
| sequence-specific DNA binding | ProSitePatterns | molecular function |
