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Gene Card

Best human hits

CCNK; CCNL1; CCNL2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008630

Gene Model ID

KH2012:KH.C7.752

Location

KhC7:3908602..3910334

Transcript Models and Sequences

  KH2012:KH.C7.752.v1.A.SL1-1

External Database Gene Card

External database links

1 result

Database Gene ID
NCBI Reference Sequence XM_002128515.4
Collections

Gateway full ORF

2 results

cien195946

Plate: VES100_B17

cien218924

Plate: VES104_A07

Gene collection 1 (N. Satoh)

1 result

cieg031g23

Plate: R1CiGC20n01

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Cyclin-like CDD Cyclin-like
Cyclin_C-dom Pfam Cyclin, C-terminal domain
Cyclin-like_sf SUPERFAMILY Cyclin-like superfamily
Cyclin_C-dom SMART Cyclin, C-terminal domain
Cyclin-like SMART Cyclin-like
Cyclin_N Pfam Cyclin, N-terminal

GOSlim

21 results

GO Term Annotation Origin Type
protein serine/threonine kinase activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
RNA processing Orthology biological process
protein phosphorylation Orthology biological process
cell cycle Orthology biological process
nuclear speck Orthology cellular component
protein kinase binding Orthology molecular function
intracellular membrane-bounded organelle Orthology cellular component
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
regulation of catalytic activity Orthology biological process
molecular transducer activity Orthology molecular function
regulation of cellular metabolic process Orthology biological process
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
enzyme regulator activity Orthology molecular function
positive regulation of catalytic activity Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
regulation of cyclin-dependent protein serine/threonine kinase activity Hs biological process
cyclin-dependent protein kinase holoenzyme complex Hs cellular component
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
RNA processing Hs biological process
cyclin-dependent protein serine/threonine kinase regulator activity Hs molecular function
nuclear speck Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
positive regulation of cyclin-dependent protein serine/threonine kinase activity Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
positive regulation of phosphorylation of RNA polymerase II C-terminal domain Hs biological process

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
cyclin-dependent protein kinase holoenzyme complex Hs cellular component 405 7.65e-138
cyclin K-CDK12 complex Hs cellular component 115 1.28e-27
cyclin K-CDK13 complex Hs cellular component 115 1.28e-27
protein serine/threonine kinase activity Hs molecular function 115 1.28e-27
cyclin-dependent protein serine/threonine kinase activity Hs molecular function 115 1.28e-27
protein binding Hs molecular function 405 7.65e-138
nucleus Hs cellular component 405 7.65e-138
nucleoplasm Hs cellular component 405 7.65e-138
RNA polymerase II carboxy-terminal domain kinase activity Hs molecular function 115 1.28e-27
cyclin-dependent protein serine/threonine kinase regulator activity Hs molecular function 405 7.65e-138
nuclear speck Hs cellular component 405 7.65e-138
protein kinase binding Hs molecular function 115 1.28e-27
intracellular membrane-bounded organelle Hs cellular component 405 7.65e-138

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleus SMART cellular component 2.0E-10

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