Aniseed - Gene card

Gene Card

Best human hits

TMEM106A; TMEM106B; TMEM106C

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008403

Gene Model ID

KH2012:KH.C7.546

Location

KhC7:2877946..2883470

Transcript Models and Sequences

KH2012:KH.C7.546.v1.A.SL1-1
KH2012:KH.C7.546.v2.A.nonSL10-1
KH2012:KH.C7.546.v2.A.nonSL11-1
KH2012:KH.C7.546.v2.A.nonSL12-1
KH2012:KH.C7.546.v2.A.nonSL3-1
KH2012:KH.C7.546.v2.A.nonSL4-1
KH2012:KH.C7.546.v2.A.nonSL5-1
KH2012:KH.C7.546.v2.A.nonSL6-1
KH2012:KH.C7.546.v2.A.nonSL7-1
KH2012:KH.C7.546.v2.A.nonSL8-1
KH2012:KH.C7.546.v2.A.nonSL9-1
KH2012:KH.C7.546.v2.R.ND2-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000021738

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad069g12

Plate: R1CiGC06n22

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
DUF1356_TMEM106	PANTHER	Protein of unknown function DUF1356, TMEM106
DUF1356_TMEM106	Pfam	Protein of unknown function DUF1356, TMEM106

GOSlim

16 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
lysosome	Orthology	cellular component
lysosomal membrane	Orthology	cellular component
endosome	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
extracellular exosome	Orthology	cellular component
organelle organization	Orthology	biological process
intracellular organelle part	Orthology	cellular component
whole membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
cell morphogenesis involved in neuron differentiation	Orthology	biological process
neuron projection morphogenesis	Orthology	biological process
neuron projection development	Orthology	biological process

GO (Orthology)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
lysosome	Hs	cellular component
lysosomal membrane	Hs	cellular component
endosome	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
lysosome organization	Hs	biological process
lysosomal transport	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
late endosome membrane	Hs	cellular component
lysosome localization	Hs	biological process
dendrite morphogenesis	Hs	biological process
extracellular exosome	Hs	cellular component
positive regulation of dendrite development	Hs	biological process

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	165	3.40e-50
lysosome	Hs	cellular component	165	3.40e-50
lysosomal membrane	Hs	cellular component	165	3.40e-50
endosome	Hs	cellular component	165	3.40e-50
endoplasmic reticulum	Hs	cellular component	140	6.83e-41
endoplasmic reticulum membrane	Hs	cellular component	140	6.83e-41
membrane	Hs	cellular component	165	3.40e-50
integral component of membrane	Hs	cellular component	165	3.40e-50
late endosome membrane	Hs	cellular component	165	3.40e-50
extracellular exosome	Hs	cellular component	165	3.40e-50

GO (InterProScan)