Aniseed - Gene card

Gene Card

Best human hits

ASB1; ASB12; ASB13

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008356

Gene Model ID

KH2012:KH.C7.502

Location

KhC7:1601681..1605104

Transcript Models and Sequences

KH2012:KH.C7.502.v1.A.ND1-1
KH2012:KH.C7.502.v2.A.SL2-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000020383
NCBI Reference Sequence	XM_002126383.4

Collections

Gene collection 1 (N. Satoh)

1 result

cicl006p23

Plate: R1CiGC09e01

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term	Analysis	Definition
Ankyrin_rpt-contain_sf	SUPERFAMILY	Ankyrin repeat-containing domain superfamily
Ankyrin_rpt	ProSiteProfiles	Ankyrin repeat
SOCS_box	ProSiteProfiles	SOCS box domain
Ankyrin_rpt-contain_sf	Gene3D	Ankyrin repeat-containing domain superfamily
SOCS_box-like_dom_sf	SUPERFAMILY	SOCS box-like domain superfamily
Ankyrin_rpt	PRINTS	Ankyrin repeat
Ankyrin_rpt-contain_dom	Pfam	Ankyrin repeat-containing domain
Ankyrin_rpt	SMART	Ankyrin repeat
Ankyrin_rpt-contain_dom	ProSiteProfiles	Ankyrin repeat-containing domain
Ankyrin_rpt-contain_dom	CDD	Ankyrin repeat-containing domain
SOCS_box	Pfam	SOCS box domain
SOCS_box	SMART	SOCS box domain

GOSlim

12 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
intracellular	Orthology	cellular component
cytosol	Orthology	cellular component
multicellular organism development	Orthology	biological process
protein ubiquitination	Orthology	biological process
intracellular signal transduction	Orthology	biological process
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
reproductive process	Orthology	biological process
animal organ development	Orthology	biological process
cellular protein modification process	Orthology	biological process
ubiquitin-protein transferase activity	Orthology	molecular function

GO (Orthology)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
ubiquitin ligase complex	Hs	cellular component
protein binding	Hs	molecular function
intracellular	Hs	cellular component
cytosol	Hs	cellular component
multicellular organism development	Hs	biological process
protein ubiquitination	Hs	biological process
male genitalia development	Hs	biological process
intracellular signal transduction	Hs	biological process
post-translational protein modification	Hs	biological process
ubiquitin protein ligase activity	Hs	molecular function

GO (Blast)

5 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ubiquitin ligase complex	Hs	cellular component	136	3.81e-37
protein binding	Hs	molecular function	136	3.81e-37
intracellular	Hs	cellular component	136	3.81e-37
cytosol	Hs	cellular component	136	3.81e-37
ubiquitin protein ligase activity	Hs	molecular function	136	3.81e-37

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
protein binding	PRINTS	molecular function	1.2E-5
intracellular signal transduction	SUPERFAMILY	biological process	9.55E-6