Aniseed - Gene card

Gene 'KH2012:KH.C6.224'

Gene Card

Best human hits

GBE1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007750

Gene Model ID

KH2012:KH.C6.224

Location

KhC6:569562..576409

Transcript Models and Sequences

KH2012:KH.C6.224.v1.A.ND1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000018363
NCBI Reference Sequence	XM_002126447.2

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
Glyco_hydro_13_cat_dom	SMART	Glycosyl hydrolase, family 13, catalytic domain
Glycoside_hydrolase_SF	SUPERFAMILY	Glycoside hydrolase superfamily
Branching_enzy	PANTHER	1,4-alpha-glucan-branching enzyme
Ig_E-set	SUPERFAMILY	Immunoglobulin E-set
A-amylase/branching_C	Pfam	Alpha-amylase/branching enzyme, C-terminal all beta
Glyco_hydro_b	Gene3D	Glycosyl hydrolase, all-beta
Ig-like_fold	Gene3D	Immunoglobulin-like fold
Glyco_hydro_13_N	Pfam	Glycoside hydrolase, family 13, N-terminal
Glyco_hydro_13_cat_dom	Pfam	Glycosyl hydrolase, family 13, catalytic domain
Branching_enzy	PIRSF	1,4-alpha-glucan-branching enzyme

GOSlim

10 results

GO Term	Annotation Origin	Type
catalytic activity	Blast	molecular function
protein binding	Blast	molecular function
cytosol	Blast	cellular component
transferase activity	Blast	molecular function
cation binding	Blast	molecular function
extracellular exosome	Blast	cellular component
hydrolase activity	Blast	molecular function
binding	Blast	molecular function
organic substance metabolic process	InterProScan	biological process
oxidation-reduction process	InterProScan	biological process

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
catalytic activity	Hs	molecular function	636
1,4-alpha-glucan branching enzyme activity	Hs	molecular function	636
hydrolase activity, hydrolyzing O-glycosyl compounds	Hs	molecular function	636
protein binding	Hs	molecular function	636
cytosol	Hs	cellular component	636
transferase activity	Hs	molecular function	636
transferase activity, transferring glycosyl groups	Hs	molecular function	636
carbohydrate binding	Hs	molecular function	636
cation binding	Hs	molecular function	636
extracellular exosome	Hs	cellular component	636
1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)	Hs	molecular function	636

GO (InterProScan)

6 results

GO Term	Analysis	Type	e-value
catalytic activity	Pfam	molecular function	1.2E-19
1,4-alpha-glucan branching enzyme activity	PANTHER	molecular function	3.6E-251
hydrolase activity, hydrolyzing O-glycosyl compounds	Pfam	molecular function	1.1E-5
carbohydrate metabolic process	Pfam	biological process	1.2E-19
glycogen biosynthetic process	PANTHER	biological process	3.6E-251
cation binding	Pfam	molecular function	1.2E-19