Aniseed - Gene card

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
Homeobox_dom	SMART	Homeobox domain
CUT_dom	ProSiteProfiles	CUT domain
Homeobox_dom	ProSiteProfiles	Homeobox domain
CUT_dom	SMART	CUT domain
Lambda_DNA-bd_dom_sf	SUPERFAMILY	Lambda repressor-like, DNA-binding domain superfamily
Homeobox_dom	CDD	Homeobox domain
Homeobox-like_sf	SUPERFAMILY	Homeobox-like domain superfamily
Homeobox_dom	Pfam	Homeobox domain
CUT_dom	Pfam	CUT domain

GOSlim

31 results

GO Term	Annotation Origin	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
Notch signaling pathway	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
cell differentiation	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
system development	Orthology	biological process
animal organ development	Orthology	biological process
cell adhesion	Orthology	biological process
cell development	Orthology	biological process
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
organic substance metabolic process	Orthology	biological process
anatomical structure development	Orthology	biological process
cytoskeleton	Orthology	cellular component
immune system process	Orthology	biological process
cell migration	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
cellular response to organic substance	Orthology	biological process
neuron development	Orthology	biological process

GO (Orthology)

34 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
liver development	Hs	biological process
regulation of cell-matrix adhesion	Hs	biological process
epithelial cell development	Hs	biological process
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription factor complex	Hs	cellular component
glucose metabolic process	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
Notch signaling pathway	Hs	biological process
endoderm development	Hs	biological process
anatomical structure morphogenesis	Hs	biological process
animal organ morphogenesis	Hs	biological process
actin cytoskeleton	Hs	cellular component
cell differentiation	Hs	biological process
B cell differentiation	Hs	biological process
positive regulation of cell migration	Hs	biological process
negative regulation of transforming growth factor beta receptor signaling pathway	Hs	biological process
pancreas development	Hs	biological process
endocrine pancreas development	Hs	biological process
cell fate commitment	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
system development	Hs	biological process
peripheral nervous system neuron development	Hs	biological process
cilium assembly	Hs	biological process

GO (Blast)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	283	7.81e-87
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	304	5.68e-95
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	304	5.68e-95
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	304	5.68e-95
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	302	1.32e-94
DNA binding	Hs	molecular function	304	5.68e-95
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	304	5.68e-95
nucleus	Hs	cellular component	304	5.68e-95
nucleoplasm	Hs	cellular component	304	5.68e-95
transcription factor complex	Hs	cellular component	283	7.81e-87
actin cytoskeleton	Hs	cellular component	304	5.68e-95

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
DNA binding	SMART	molecular function	9.3E-43

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Gene collection 1 (N. Satoh)

citb2e10

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)