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GENE CARD

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Gene Card

Best human hits

CXCR4; RXFP3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007707

Gene Model ID

KH2012:KH.C6.184

Location

KhC6:649541..658770

Transcript Models and Sequences

  KH2012:KH.C6.184.v1.A.ND1-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000014875
ENSEMBL ENSCING00000022107
NCBI Reference Sequence XM_018812284.1
Collections

Gateway full ORF

1 result

cima835448

Plate: VES62_M19

Gene collection 1 (N. Satoh)

1 result

cinc033n18

Plate: R1CiGC45j21

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

1 results

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
GPCR_Rhodpsn Pfam G protein-coupled receptor, rhodopsin-like
GPCR_Rhodpsn ProSitePatterns G protein-coupled receptor, rhodopsin-like
GPCR_Rhodpsn SMART G protein-coupled receptor, rhodopsin-like
GPCR_Rhodpsn_7TM ProSiteProfiles GPCR, rhodopsin-like, 7TM
GPCR_Rhodpsn PRINTS G protein-coupled receptor, rhodopsin-like

GOSlim

24 results

GO Term Annotation Origin Type
actin binding Blast molecular function
signal transducer activity Blast molecular function
G-protein coupled receptor activity Blast molecular function
protein binding Blast molecular function
cytoplasm Blast cellular component
lysosome Blast cellular component
endosome Blast cellular component
early endosome Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
G-protein coupled receptor signaling pathway InterProScan biological process
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cell junction Blast cellular component
cell leading edge Blast cellular component
cytoplasmic vesicle Blast cellular component
ubiquitin protein ligase binding Blast molecular function
macromolecular complex Blast cellular component
extracellular exosome Blast cellular component
binding Blast molecular function
cytokine-mediated signaling pathway Blast biological process
signaling receptor activity Blast molecular function
cytoskeletal protein binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
virus receptor activity Hs molecular function 132 3.93e-35
actin binding Hs molecular function 132 3.93e-35
signal transducer activity Hs molecular function 141 1.60e-37
G-protein coupled receptor activity Hs molecular function 141 1.60e-37
chemokine receptor activity Hs molecular function 132 3.93e-35
galanin receptor activity Hs molecular function 141 1.60e-37
protein binding Hs molecular function 132 3.93e-35
cytoplasm Hs cellular component 132 3.93e-35
lysosome Hs cellular component 132 3.93e-35
endosome Hs cellular component 132 3.93e-35
early endosome Hs cellular component 132 3.93e-35
late endosome Hs cellular component 132 3.93e-35
plasma membrane Hs cellular component 141 1.60e-37
integral component of plasma membrane Hs cellular component 141 1.60e-37
G-protein coupled peptide receptor activity Hs molecular function 141 1.60e-37
cell surface Hs cellular component 132 3.93e-35
coreceptor activity Hs molecular function 132 3.93e-35
membrane Hs cellular component 141 1.60e-37
integral component of membrane Hs cellular component 141 1.60e-37
C-X-C chemokine receptor activity Hs molecular function 132 3.93e-35
cytokine binding Hs molecular function 132 3.93e-35
C-C chemokine binding Hs molecular function 132 3.93e-35
cell junction Hs cellular component 132 3.93e-35
cell leading edge Hs cellular component 132 3.93e-35
cytoplasmic vesicle Hs cellular component 132 3.93e-35
ubiquitin protein ligase binding Hs molecular function 132 3.93e-35
myosin light chain binding Hs molecular function 132 3.93e-35
macromolecular complex Hs cellular component 132 3.93e-35
ubiquitin binding Hs molecular function 132 3.93e-35
extracellular exosome Hs cellular component 132 3.93e-35

GO (InterProScan)

3 results

GO Term Analysis Type e-value
G-protein coupled receptor activity PRINTS molecular function 4.1E-41
G-protein coupled receptor signaling pathway PRINTS biological process 4.1E-41
integral component of membrane PRINTS cellular component 4.1E-41

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