- Gene 'KH2012:KH.C6.171'
Gene Card
Best human hits
CMSS1; DDX39A; DDX39B
Unique Gene ID
Cirobu.g00007693
Gene Model ID
KH2012:KH.C6.171
Location
KhC6:865241..907297
Transcript Models and Sequences
Gateway full ORF
2 results
cima828781
Plate: VES61_G13
cien189528
Plate: VES99_C16
Gene collection 1 (N. Satoh)
1 result
cieg025g09
Plate: R1CiGC19h17
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
3 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Cms1 | Pfam | Protein Cms1 |
| P-loop_NTPase | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolase |
| Cms1 | PANTHER | Protein Cms1 |
GOSlim
16 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleotide binding | Blast | molecular function |
| nucleic acid binding | Blast | molecular function |
| RNA binding | Orthology | molecular function |
| protein binding | Blast | molecular function |
| ATP binding | Blast | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Blast | cellular component |
| nucleolus | Orthology | cellular component |
| cytoplasm | Blast | cellular component |
| membrane | Blast | cellular component |
| nuclear speck | Blast | cellular component |
| hydrolase activity | Blast | molecular function |
| identical protein binding | Blast | molecular function |
| macromolecular complex | Orthology | cellular component |
| nucleoside-triphosphatase activity | Blast | molecular function |
| nuclear part | Blast | cellular component |
GO (Orthology)
3 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| RNA binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| 90S preribosome | Hs | cellular component |
GO (Blast)
18 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleotide binding | Hs | molecular function | 38.9 | 0.002 |
| nucleic acid binding | Hs | molecular function | 38.9 | 0.002 |
| RNA binding | Hs | molecular function | 165 | 6.73e-50 |
| ATP-dependent RNA helicase activity | Hs | molecular function | 38.9 | 0.002 |
| helicase activity | Hs | molecular function | 38.9 | 0.002 |
| protein binding | Hs | molecular function | 38.9 | 0.002 |
| ATP binding | Hs | molecular function | 38.9 | 0.002 |
| nucleus | Hs | cellular component | 165 | 6.73e-50 |
| nucleoplasm | Hs | cellular component | 38.9 | 0.002 |
| spliceosomal complex | Hs | cellular component | 38.9 | 0.002 |
| nucleolus | Hs | cellular component | 38.9 | 0.002 |
| cytoplasm | Hs | cellular component | 38.9 | 0.002 |
| membrane | Hs | cellular component | 38.9 | 0.002 |
| nuclear speck | Hs | cellular component | 38.9 | 0.002 |
| hydrolase activity | Hs | molecular function | 38.9 | 0.002 |
| ATPase activity | Hs | molecular function | 38.9 | 0.002 |
| 90S preribosome | Hs | cellular component | 165 | 6.73e-50 |
| identical protein binding | Hs | molecular function | 38.9 | 0.002 |
| GO Term | Analysis | Type | e-value |
|---|
