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GENE CARD

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  1. Gene 'KH2012:KH.C6.118'

Gene Card

Best human hits

ANKIB1; ARIH1; ARIH2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007634

Gene Model ID

KH2012:KH.C6.118

Location

KhC6:522742..531013

Transcript Models and Sequences

  KH2012:KH.C6.118.v1.A.SL1-1
KH2012:KH.C6.118.v1.A.SL2-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000007851
NCBI Reference Sequence XM_002132068.3
Collections

Gateway full ORF

2 results

cien89267

Plate: VES84_I08

cien92262

Plate: VES84_O18

Gene collection 1 (N. Satoh)

1 result

cicl048o12

Plate: R1CiGC13n17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Ariadne-2 PANTHER E3 ubiquitin-protein ligase ARIH2
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
IBR_dom Pfam IBR domain
Znf_RING ProSiteProfiles Zinc finger, RING-type
E3_UB_ligase_RBR PANTHER E3 ubiquitin ligase RBR family
IBR_dom SMART IBR domain

GOSlim

25 results

GO Term Annotation Origin Type
protein polyubiquitination Orthology biological process
ubiquitin-protein transferase activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytosol Blast cellular component
multicellular organism development Orthology biological process
zinc ion binding Orthology molecular function
protein ubiquitination Orthology biological process
nuclear body Blast cellular component
transferase activity Orthology molecular function
ubiquitin-like protein transferase activity Blast molecular function
ubiquitin protein ligase binding Blast molecular function
metal ion binding Orthology molecular function
proteolysis Orthology biological process
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
enzyme binding Orthology molecular function
cell development Orthology biological process
cell proliferation Orthology biological process
animal organ development Orthology biological process
immune system process Orthology biological process
cell division Orthology biological process
neuron part Blast cellular component

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein polyubiquitination Hs biological process
ubiquitin-protein transferase activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
ubiquitin-dependent protein catabolic process Hs biological process
multicellular organism development Hs biological process
zinc ion binding Hs molecular function
protein ubiquitination Hs biological process
transferase activity Hs molecular function
Cul5-RING ubiquitin ligase complex Hs cellular component
ubiquitin conjugating enzyme binding Hs molecular function
positive regulation of proteasomal ubiquitin-dependent protein catabolic process Hs biological process
metal ion binding Hs molecular function
developmental cell growth Hs biological process
ubiquitin protein ligase activity Hs molecular function
protein K63-linked ubiquitination Hs biological process
protein K48-linked ubiquitination Hs biological process
hematopoietic stem cell proliferation Hs biological process

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ubiquitin ligase complex Hs cellular component 257 4.98e-79
ubiquitin-protein transferase activity Hs molecular function 484 3.22e-168
protein binding Hs molecular function 484 3.22e-168
nucleus Hs cellular component 484 3.22e-168
nucleoplasm Hs cellular component 484 3.22e-168
cytoplasm Hs cellular component 484 3.22e-168
cytosol Hs cellular component 257 4.98e-79
zinc ion binding Hs molecular function 484 3.22e-168
Cajal body Hs cellular component 257 4.98e-79
nuclear body Hs cellular component 257 4.98e-79
transferase activity Hs molecular function 484 3.22e-168
SCF ubiquitin ligase complex Hs cellular component 257 4.98e-79
ubiquitin-like protein transferase activity Hs molecular function 257 4.98e-79
Cul2-RING ubiquitin ligase complex Hs cellular component 257 4.98e-79
Cul3-RING ubiquitin ligase complex Hs cellular component 257 4.98e-79
Cul4A-RING E3 ubiquitin ligase complex Hs cellular component 257 4.98e-79
Cul5-RING ubiquitin ligase complex Hs cellular component 484 3.22e-168
ubiquitin conjugating enzyme binding Hs molecular function 484 3.22e-168
ubiquitin protein ligase binding Hs molecular function 257 4.98e-79
metal ion binding Hs molecular function 484 3.22e-168
ubiquitin protein ligase activity Hs molecular function 484 3.22e-168
Lewy body Hs cellular component 257 4.98e-79

GO (InterProScan)

2 results

GO Term Analysis Type e-value
ubiquitin-protein transferase activity PANTHER molecular function 2.8E-198
protein ubiquitination PANTHER biological process 2.8E-198

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