Gene Card
Best human hits
BOP1; PAFAH1B1; TBL1Y
Unique Gene ID
Cirobu.g00007613
Gene Model ID
KH2012:KH.C6.1
Location
KhC6:1059171..1066942
Transcript Models and Sequences
External database links
1 result
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000006069 |
Gateway full ORF
6 results
cien103345
Plate: VES86_J11
cien51650
Plate: VES78_B08
cien54933
Plate: VES78_F22
cien66268
Plate: VES80_H14
cien76018
Plate: VES82_B07
cien124494
Plate: VES89_M18
Gene collection 1 (N. Satoh)
1 result
cilv006g08
Plate: R1CiGC25o08
n/a
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Click here to see the tree inference method
InterPro
11 results
| IPR Term | Analysis | Definition |
|---|---|---|
| BOP1_N_dom | Pfam | BOP1, N-terminal domain |
| WD40_repeat_CS | ProSitePatterns | WD40 repeat, conserved site |
| WD40_repeat_dom | ProSiteProfiles | WD40-repeat-containing domain |
| WD40/YVTN_repeat-like_dom_sf | Gene3D | WD40/YVTN repeat-like-containing domain superfamily |
| WD40_repeat_dom_sf | SUPERFAMILY | WD40-repeat-containing domain superfamily |
| BOP1_N_dom | SMART | BOP1, N-terminal domain |
| WD40_repeat | SMART | WD40 repeat |
| BOP1/Erb1 | PANTHER | WD repeat BOP1/Erb1 |
| WD40_repeat | ProSiteProfiles | WD40 repeat |
| WD40_repeat | Pfam | WD40 repeat |
| BOP1/Erb1 | Hamap | WD repeat BOP1/Erb1 |
GOSlim
46 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| transcription corepressor activity | Blast | molecular function |
| RNA binding | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nuclear envelope | Blast | cellular component |
| nucleoplasm | Orthology | cellular component |
| nucleolus | Orthology | cellular component |
| cytoplasm | Blast | cellular component |
| centrosome | Blast | cellular component |
| microtubule organizing center | Blast | cellular component |
| cytosol | Blast | cellular component |
| cytoskeleton | Blast | cellular component |
| microtubule | Blast | cellular component |
| cell cycle | Orthology | biological process |
| microtubule binding | Blast | molecular function |
| cell proliferation | Orthology | biological process |
| microtubule cytoskeleton | Blast | cellular component |
| membrane | Blast | cellular component |
| axon | Blast | cellular component |
| cell leading edge | Blast | cellular component |
| nuclear membrane | Blast | cellular component |
| vesicle | Blast | cellular component |
| protein homodimerization activity | Blast | molecular function |
| neuron projection | Blast | cellular component |
| neuronal cell body | Blast | cellular component |
| perinuclear region of cytoplasm | Blast | cellular component |
| extracellular exosome | Blast | cellular component |
| RNA processing | Orthology | biological process |
| macromolecular complex | Orthology | cellular component |
| macromolecular complex binding | Orthology | molecular function |
| nucleoplasm part | Blast | cellular component |
| cytoplasmic part | Blast | cellular component |
| intracellular organelle part | Blast | cellular component |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| hydrolase activity | Blast | molecular function |
| cytoskeletal part | Blast | cellular component |
| cell periphery | Blast | cellular component |
| anion binding | Blast | molecular function |
| carbohydrate derivative binding | Blast | molecular function |
| cell projection part | Blast | cellular component |
| organelle | Blast | cellular component |
| cell projection | Blast | cellular component |
| plasma membrane region | Blast | cellular component |
| cluster of actin-based cell projections | Blast | cellular component |
| cytoskeletal protein binding | Blast | molecular function |
| enzyme binding | Blast | molecular function |
GO (Orthology)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| ribosomal large subunit assembly | Hs | biological process |
| cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Hs | biological process |
| maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Hs | biological process |
| RNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| nucleolus | Hs | cellular component |
| rRNA processing | Hs | biological process |
| cell proliferation | Hs | biological process |
| intracellular ribonucleoprotein complex | Hs | cellular component |
| preribosome, large subunit precursor | Hs | cellular component |
| ribosome biogenesis | Hs | biological process |
| ribosomal large subunit biogenesis | Hs | biological process |
| ribonucleoprotein complex binding | Hs | molecular function |
| regulation of cell cycle | Hs | biological process |
| PeBoW complex | Hs | cellular component |
GO (Blast)
48 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| histone deacetylase complex | Hs | cellular component | 50.4 | 2.95e-06 |
| astral microtubule | Hs | cellular component | 49.7 | 3.74e-06 |
| kinetochore | Hs | cellular component | 49.7 | 3.74e-06 |
| transcription corepressor activity | Hs | molecular function | 50.4 | 2.95e-06 |
| RNA binding | Hs | molecular function | 814 | 0.0 |
| phospholipase A2 activity | Hs | molecular function | 49.7 | 3.74e-06 |
| protein binding | Hs | molecular function | 814 | 0.0 |
| nucleus | Hs | cellular component | 814 | 0.0 |
| nuclear envelope | Hs | cellular component | 49.7 | 3.74e-06 |
| nucleoplasm | Hs | cellular component | 814 | 0.0 |
| nucleolus | Hs | cellular component | 814 | 0.0 |
| cytoplasm | Hs | cellular component | 49.7 | 3.74e-06 |
| centrosome | Hs | cellular component | 49.7 | 3.74e-06 |
| microtubule organizing center | Hs | cellular component | 49.7 | 3.74e-06 |
| spindle | Hs | cellular component | 49.7 | 3.74e-06 |
| cytosol | Hs | cellular component | 49.7 | 3.74e-06 |
| cytoskeleton | Hs | cellular component | 49.7 | 3.74e-06 |
| kinesin complex | Hs | cellular component | 49.7 | 3.74e-06 |
| microtubule | Hs | cellular component | 49.7 | 3.74e-06 |
| microtubule associated complex | Hs | cellular component | 49.7 | 3.74e-06 |
| cell cortex | Hs | cellular component | 49.7 | 3.74e-06 |
| microtubule binding | Hs | molecular function | 49.7 | 3.74e-06 |
| heparin binding | Hs | molecular function | 49.7 | 3.74e-06 |
| microtubule cytoskeleton | Hs | cellular component | 49.7 | 3.74e-06 |
| membrane | Hs | cellular component | 49.7 | 3.74e-06 |
| axon | Hs | cellular component | 49.7 | 3.74e-06 |
| growth cone | Hs | cellular component | 49.7 | 3.74e-06 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 814 | 0.0 |
| preribosome, large subunit precursor | Hs | cellular component | 814 | 0.0 |
| cell leading edge | Hs | cellular component | 49.7 | 3.74e-06 |
| motile cilium | Hs | cellular component | 49.7 | 3.74e-06 |
| nuclear membrane | Hs | cellular component | 49.7 | 3.74e-06 |
| vesicle | Hs | cellular component | 49.7 | 3.74e-06 |
| stereocilium | Hs | cellular component | 49.7 | 3.74e-06 |
| dynactin binding | Hs | molecular function | 49.7 | 3.74e-06 |
| protein homodimerization activity | Hs | molecular function | 49.7 | 3.74e-06 |
| neuron projection | Hs | cellular component | 49.7 | 3.74e-06 |
| ribonucleoprotein complex binding | Hs | molecular function | 814 | 0.0 |
| neuronal cell body | Hs | cellular component | 49.7 | 3.74e-06 |
| phospholipase binding | Hs | molecular function | 49.7 | 3.74e-06 |
| dynein intermediate chain binding | Hs | molecular function | 49.7 | 3.74e-06 |
| perinuclear region of cytoplasm | Hs | cellular component | 49.7 | 3.74e-06 |
| phosphoprotein binding | Hs | molecular function | 49.7 | 3.74e-06 |
| extracellular exosome | Hs | cellular component | 49.7 | 3.74e-06 |
| PeBoW complex | Hs | cellular component | 814 | 0.0 |
| dynein complex binding | Hs | molecular function | 49.7 | 3.74e-06 |
| central region of growth cone | Hs | cellular component | 49.7 | 3.74e-06 |
| axon cytoplasm | Hs | cellular component | 49.7 | 3.74e-06 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | Gene3D | molecular function | 1.3E-155 |
| rRNA processing | SMART | biological process | 1.1E-175 |
| ribosome biogenesis | PANTHER | biological process | 0.0 |
