Aniseed - Gene card

Gene Card

Best human hits

JMJD7; KDM8; TYW5

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007551

Gene Model ID

KH2012:KH.C5.644

Location

KhC5:4898631..4901165

Transcript Models and Sequences

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000021810
NCBI Reference Sequence	XM_002130659.4
NCBI Reference Sequence	XM_004226035.3

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

1 result

cicl031m12

Plate: R1CiGC12k20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
JmjC_dom	SMART	JmjC domain
JmjC_dom	ProSiteProfiles	JmjC domain

GOSlim

23 results

GO Term	Annotation Origin	Type
G2/M transition of mitotic cell cycle	Orthology	biological process
chromatin binding	Orthology	molecular function
iron ion binding	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Blast	cellular component
cytosol	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
proteolysis	Orthology	biological process
cell cycle	Orthology	biological process
peptidase activity	Orthology	molecular function
hydrolase activity	Orthology	molecular function
protein homodimerization activity	Blast	molecular function
positive regulation of transcription, DNA-templated	Orthology	biological process
metal ion binding	Orthology	molecular function
oxidation-reduction process	Orthology	biological process
intracellular non-membrane-bounded organelle	Orthology	cellular component
organelle organization	Orthology	biological process
catalytic activity	Orthology	molecular function
cellular protein modification process	Orthology	biological process
RNA binding	Blast	molecular function

GO (Orthology)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
G2/M transition of mitotic cell cycle	Hs	biological process
chromatin binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
chromosome	Hs	cellular component
cytosol	Hs	cellular component
chromatin organization	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
proteolysis	Hs	biological process
cell cycle	Hs	biological process
peptidase activity	Hs	molecular function
oxidoreductase activity	Hs	molecular function
hydrolase activity	Hs	molecular function
histone demethylase activity	Hs	molecular function
positive regulation of transcription, DNA-templated	Hs	biological process
metal ion binding	Hs	molecular function
dioxygenase activity	Hs	molecular function
histone demethylase activity (H3-K36 specific)	Hs	molecular function
oxidation-reduction process	Hs	biological process
histone H3-K36 demethylation	Hs	biological process

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
tRNA binding	Hs	molecular function	73.2	2.27e-14
chromatin binding	Hs	molecular function	337	1.67e-112
iron ion binding	Hs	molecular function	73.2	2.27e-14
protein binding	Hs	molecular function	73.9	1.46e-14
nucleus	Hs	cellular component	337	1.67e-112
nucleoplasm	Hs	cellular component	337	1.67e-112
chromosome	Hs	cellular component	337	1.67e-112
cytoplasm	Hs	cellular component	73.2	2.27e-14
cytosol	Hs	cellular component	337	1.67e-112
peptidase activity	Hs	molecular function	337	1.67e-112
oxidoreductase activity	Hs	molecular function	337	1.67e-112
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	Hs	molecular function	73.2	2.27e-14
hydrolase activity	Hs	molecular function	337	1.67e-112
histone demethylase activity	Hs	molecular function	337	1.67e-112
protein homodimerization activity	Hs	molecular function	73.2	2.27e-14
metal ion binding	Hs	molecular function	337	1.67e-112
dioxygenase activity	Hs	molecular function	337	1.67e-112
histone demethylase activity (H3-K36 specific)	Hs	molecular function	337	1.67e-112
tRNAPhe (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity	Hs	molecular function	73.2	2.27e-14

GO (InterProScan)