Gene Card
Best human hits
ELAVL3; RAVER1; RAVER2
Unique Gene ID
Cirobu.g00007511
Gene Model ID
KH2012:KH.C5.608
Location
KhC5:1801976..1812213
Transcript Models and Sequences
KH2012:KH.C5.608.v1.A.SL1-1
KH2012:KH.C5.608.v1.A.SL2-1
KH2012:KH.C5.608.v1.A.SL3-1
External database links
3 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000002523 |
| ENSEMBL | ENSCING00000019885 |
| NCBI Reference Sequence | XM_002120194.3 |
Gateway full ORF
2 results
cima864310
Plate: VES65_F11
cien168920
Plate: VES96_M10
Gene collection 1 (N. Satoh)
1 result
cieg009f01
Plate: R1CiGC17a11
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| RRM_dom | Pfam | RNA recognition motif domain |
| RRM_dom | SMART | RNA recognition motif domain |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
GOSlim
5 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| mRNA splicing, via spliceosome | Orthology | biological process |
| nucleic acid binding | Orthology | molecular function |
| RNA binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
GO (Orthology)
5 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| mRNA splicing, via spliceosome | Hs | biological process |
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
GO (Blast)
5 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 193 | 7.23e-52 |
| RNA binding | Hs | molecular function | 193 | 7.23e-52 |
| nucleus | Hs | cellular component | 193 | 7.23e-52 |
| cytoplasm | Hs | cellular component | 193 | 7.23e-52 |
| AU-rich element binding | Hs | molecular function | 70.1 | 1.39e-12 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 1.42E-25 |
