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GENE CARD

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  1. Gene 'KH2012:KH.C5.59'

Gene Card

Best human hits

ZNF598

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007490

Gene Model ID

KH2012:KH.C5.59

Location

KhC5:4748936..4751871

Transcript Models and Sequences

  KH2012:KH.C5.59.v1.A.ND2-1
KH2012:KH.C5.59.v1.A.SL1-1
KH2012:KH.C5.59.v1.A.SL3-1
KH2012:KH.C5.59.v1.A.SL4-1
KH2012:KH.C5.59.v1.A.SL5-1

External Database Gene Card

External database links

1 result

Database Gene ID
NCBI Reference Sequence XM_002131116.3
Collections

Gateway full ORF

3 results

cima832957

Plate: VES62_M10

cien160510

Plate: VES95_O02

cien213308

Plate: VES103_N09

Gene collection 1 (N. Satoh)

2 results

cieg004l08

Plate: R1CiGC16i07

cieg049n18

Plate: R1CiGC23h03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_RING ProSiteProfiles Zinc finger, RING-type
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_C2H2_type SMART Zinc finger C2H2-type
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type

GOSlim

1 result

GO Term Annotation Origin Type
nucleic acid binding Orthology molecular function

GO (Orthology)

1 result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleic acid binding Hs molecular function

GO (Blast)

1 result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleic acid binding Hs molecular function 293 1.52e-87

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 11.0

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