Aniseed - Gene card

Gene 'KH2012:KH.C5.515'

Gene Card

Best human hits

C3orf20; ERICH6

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007408

Gene Model ID

KH2012:KH.C5.515

Location

KhC5:2031642..2040286

Transcript Models and Sequences

KH2012:KH.C5.515.v1.A.ND1-1

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000009338
ENSEMBL	ENSCING00000025186
NCBI Reference Sequence	XM_018812029.1
NCBI Reference Sequence	XM_018812030.1

Collections

Gene collection 1 (N. Satoh)

1 result

cits044i24

Plate: R1CiGC35b23

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
FAM194	Pfam	FAM194 family

GOSlim

19 results

GO Term	Annotation Origin	Type
cytoplasm	Blast	cellular component
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
cell differentiation	Orthology	biological process
sequence-specific DNA binding	Orthology	molecular function
transcription regulatory region DNA binding	Orthology	molecular function
transcription factor binding	Orthology	molecular function
transcription initiation from RNA polymerase II promoter	Orthology	biological process
DNA replication	Orthology	biological process

GO (Orthology)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcription factor activity, RNA polymerase II transcription factor recruiting	Hs	molecular function
DNA binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
transcription, DNA-templated	Hs	biological process
DNA-templated transcription, termination	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
termination of RNA polymerase I transcription	Hs	biological process
negative regulation of DNA replication	Hs	biological process
cell differentiation	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
transcription regulatory region DNA binding	Hs	molecular function

GO (Blast)

3 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
cytoplasm	Hs	cellular component	139	1.21e-33
membrane	Hs	cellular component	139	1.21e-33
integral component of membrane	Hs	cellular component	139	1.21e-33

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value