Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000012311
NCBI Reference Sequence	XM_002127463.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb3b8

Plate: R1CiGC28l14

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

1 results

Cirobu.REG.KhC5:42519-45326|Nkx6 REG00001518 [ regulatory_region (enhancer) ]

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Homeobox_CS	ProSitePatterns	Homeobox, conserved site
Homeobox_dom	SMART	Homeobox domain
Homeobox-like_sf	SUPERFAMILY	Homeobox-like domain superfamily
Homeobox_dom	CDD	Homeobox domain
Homeobox_dom	ProSiteProfiles	Homeobox domain
Homeobox_metazoa	PRINTS	Homeobox domain, metazoa
Homeobox_dom	Pfam	Homeobox domain

GOSlim

34 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
nucleus	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
multicellular organism development	Orthology	biological process
cell proliferation	Orthology	biological process
neurogenesis	Orthology	biological process
cell differentiation	Orthology	biological process
sequence-specific DNA binding	Orthology	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
extracellular exosome	Orthology	cellular component
cell migration	Orthology	biological process
generation of neurons	Orthology	biological process
animal organ development	Orthology	biological process
cell development	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
central nervous system development	Orthology	biological process
neuron differentiation	Orthology	biological process
axonogenesis	Orthology	biological process
nervous system development	Orthology	biological process
protein transport	Orthology	biological process
cell-cell signaling	Orthology	biological process
regulation of signaling	Orthology	biological process
nervous system process	Orthology	biological process

GO (Orthology)

42 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
neuron migration	Hs	biological process
type B pancreatic cell differentiation	Hs	biological process
type B pancreatic cell development	Hs	biological process
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
smoothened signaling pathway	Hs	biological process
multicellular organism development	Hs	biological process
cell proliferation	Hs	biological process
animal organ morphogenesis	Hs	biological process
central nervous system neuron differentiation	Hs	biological process
neurogenesis	Hs	biological process
central nervous system myelination	Hs	biological process
cell differentiation	Hs	biological process
regulation of axon extension	Hs	biological process
pancreas development	Hs	biological process
endocrine pancreas development	Hs	biological process
regulation of myelination	Hs	biological process
positive regulation of insulin secretion	Hs	biological process
response to nicotine	Hs	biological process
response to drug	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
type B pancreatic cell proliferation	Hs	biological process
positive regulation of neuron differentiation	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
oligodendrocyte differentiation	Hs	biological process
regulation of insulin secretion	Hs	biological process
neuromuscular process controlling balance	Hs	biological process
positive regulation of sequence-specific DNA binding transcription factor activity	Hs	biological process
extracellular exosome	Hs	cellular component
regulation of neuron migration	Hs	biological process

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	202	6.69e-62
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	202	6.69e-62
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	202	6.69e-62
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	138	8.42e-38
DNA binding	Hs	molecular function	202	6.69e-62
chromatin binding	Hs	molecular function	202	9.30e-61
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	202	6.69e-62
nucleus	Hs	cellular component	202	6.69e-62
sequence-specific DNA binding	Hs	molecular function	202	6.69e-62
extracellular exosome	Hs	cellular component	202	9.30e-61

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
DNA binding	SUPERFAMILY	molecular function	3.94E-22
regulation of transcription, DNA-templated	ProSitePatterns	biological process
sequence-specific DNA binding	ProSitePatterns	molecular function

Gene Card

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