- Gene 'KH2012:KH.C5.416'
Gene Card
Best human hits
ATOH1; NEUROD6; PTF1A
Unique Gene ID
Cirobu.g00007298
Gene Model ID
KH2012:KH.C5.416
Location
KhC5:2027366..2028664
Transcript Models and Sequences
KH2012:KH.C5.416.v1.A.nonSL1-1
KH2012:KH.C5.416.v1.A.nonSL2-1
Gateway full ORF
2 results
cien112665
Plate: VES88_H01
cien151489
Plate: VES93_M19
Gene collection 1 (N. Satoh)
1 result
cicl029j13
Plate: R1CiGC12i13
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| bHLH_dom | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain |
| bHLH_dom | CDD | Myc-type, basic helix-loop-helix (bHLH) domain |
| Twist-related | PANTHER | Twist-related |
| bHLH_dom | SMART | Myc-type, basic helix-loop-helix (bHLH) domain |
| HLH_DNA-bd_sf | Gene3D | Helix-loop-helix DNA-binding domain superfamily |
| HLH_DNA-bd_sf | SUPERFAMILY | Helix-loop-helix DNA-binding domain superfamily |
| bHLH_dom | Pfam | Myc-type, basic helix-loop-helix (bHLH) domain |
GOSlim
13 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Blast | molecular function |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| chromatin binding | Blast | molecular function |
| transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| intracellular | Blast | cellular component |
| nucleus | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| sequence-specific DNA binding | Blast | molecular function |
| protein dimerization activity | Blast | molecular function |
| RNA polymerase II regulatory region sequence-specific DNA binding | Blast | molecular function |
| intracellular part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
15 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Hs | molecular function | 47.0 | 1.71e-06 |
| RNA polymerase II distal enhancer sequence-specific DNA binding | Hs | molecular function | 42.4 | 5.51e-05 |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 47.0 | 1.71e-06 |
| transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding | Hs | molecular function | 47.0 | 1.71e-06 |
| DNA binding | Hs | molecular function | 47.0 | 1.71e-06 |
| chromatin binding | Hs | molecular function | 42.4 | 5.51e-05 |
| transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 47.0 | 1.71e-06 |
| intracellular | Hs | cellular component | 42.4 | 5.51e-05 |
| nucleus | Hs | cellular component | 47.0 | 1.71e-06 |
| transcription factor complex | Hs | cellular component | 42.4 | 5.51e-05 |
| cytoplasm | Hs | cellular component | 42.4 | 5.51e-05 |
| chromatin DNA binding | Hs | molecular function | 47.0 | 1.71e-06 |
| sequence-specific DNA binding | Hs | molecular function | 47.0 | 1.71e-06 |
| protein dimerization activity | Hs | molecular function | 47.0 | 1.71e-06 |
| E-box binding | Hs | molecular function | 42.4 | 5.51e-05 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein dimerization activity | Gene3D | molecular function | 1.2E-13 |
