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Gene Card

Best human hits

FGD6; ZFYVE16; ZFYVE9

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007241

Gene Model ID

KH2012:KH.C5.365

Location

KhC5:1138943..1150733

Transcript Models and Sequences

  KH2012:KH.C5.365.v1.B.SL1-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000006291
Collections

Gateway full ORF

2 results

cien57070

Plate: VES79_E06

cien193427

Plate: VES100_K06

Gene collection 1 (N. Satoh)

1 result

cieg016k11

Plate: R1CiGC18e07

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Znf_FYVE SMART FYVE zinc finger
DUF3480 Pfam Domain of unknown function DUF3480
Znf_FYVE_PHD SUPERFAMILY Zinc finger, FYVE/PHD-type
Znf_FYVE Pfam FYVE zinc finger
Znf_FYVE-rel ProSiteProfiles Zinc finger, FYVE-related
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type

GOSlim

33 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
cytoplasm Orthology cellular component
endosome Orthology cellular component
early endosome Orthology cellular component
Golgi apparatus Blast cellular component
cytosol Orthology cellular component
cytoskeleton Blast cellular component
proteolysis Orthology biological process
signal transduction Orthology biological process
serine-type peptidase activity Orthology molecular function
membrane Orthology cellular component
lamellipodium Blast cellular component
macromolecular complex Orthology cellular component
intracellular membrane-bounded organelle Orthology cellular component
metal ion binding Orthology molecular function
anion binding Orthology molecular function
protein targeting Orthology biological process
establishment of protein localization to organelle Orthology biological process
membrane organization Orthology biological process
organelle organization Orthology biological process
cell surface receptor signaling pathway Orthology biological process
cellular response to organic substance Orthology biological process
protein transport Orthology biological process
intracellular transport Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
whole membrane Orthology cellular component
intracellular organelle part Orthology cellular component
bounding membrane of organelle Orthology cellular component
cell projection Blast cellular component
plasma membrane region Blast cellular component
cell leading edge Blast cellular component
enzyme binding Blast molecular function
molecular function regulator Blast molecular function

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein binding Hs molecular function
1-phosphatidylinositol binding Hs molecular function
phosphatidylinositol-3,4,5-trisphosphate binding Hs molecular function
cytoplasm Hs cellular component
endosome Hs cellular component
early endosome Hs cellular component
cytosol Hs cellular component
proteolysis Hs biological process
protein targeting to lysosome Hs biological process
endocytosis Hs biological process
signal transduction Hs biological process
transforming growth factor beta receptor signaling pathway Hs biological process
serine-type peptidase activity Hs molecular function
protein transporter activity Hs molecular function
membrane Hs cellular component
vesicle organization Hs biological process
endosomal transport Hs biological process
protein domain specific binding Hs molecular function
regulation of endocytosis Hs biological process
BMP signaling pathway Hs biological process
early endosome membrane Hs cellular component
macromolecular complex Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
metal ion binding Hs molecular function

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ruffle Hs cellular component 94.0 3.10e-19
guanyl-nucleotide exchange factor activity Hs molecular function 94.0 3.10e-19
Rho guanyl-nucleotide exchange factor activity Hs molecular function 94.0 3.10e-19
protein binding Hs molecular function 469 1.04e-143
1-phosphatidylinositol binding Hs molecular function 469 1.04e-143
phosphatidylinositol-3,4,5-trisphosphate binding Hs molecular function 324 6.39e-92
cytoplasm Hs cellular component 469 1.04e-143
endosome Hs cellular component 469 1.04e-143
early endosome Hs cellular component 469 1.04e-143
Golgi apparatus Hs cellular component 94.0 3.10e-19
cytosol Hs cellular component 469 1.04e-143
cytoskeleton Hs cellular component 94.0 3.10e-19
serine-type peptidase activity Hs molecular function 469 1.04e-143
protein transporter activity Hs molecular function 324 6.39e-92
membrane Hs cellular component 469 1.04e-143
protein domain specific binding Hs molecular function 469 1.04e-143
lamellipodium Hs cellular component 94.0 3.10e-19
small GTPase binding Hs molecular function 94.0 3.10e-19
early endosome membrane Hs cellular component 469 1.04e-143
macromolecular complex Hs cellular component 469 1.04e-143
intracellular membrane-bounded organelle Hs cellular component 469 1.04e-143
metal ion binding Hs molecular function 469 1.04e-143

GO (InterProScan)

1 result

GO Term Analysis Type e-value
metal ion binding SMART molecular function 7.4E-27

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