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GENE CARD

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Gene Card

Best human hits

ADD1; ADD2; ADD3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007083

Gene Model ID

KH2012:KH.C5.215

Location

KhC5:2896730..2911438

Transcript Models and Sequences

  KH2012:KH.C5.215.v1.A.SL1-1
KH2012:KH.C5.215.v2.A.SL1-4
KH2012:KH.C5.215.v3.A.SL1-3
KH2012:KH.C5.215.v4.A.SL1-1
KH2012:KH.C5.215.v5.A.SL1-2

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000009296
NCBI Reference Sequence XM_002120472.4
Collections

Gateway full ORF

2 results

cien64318

Plate: VES80_L07

cien120688

Plate: VES89_C05

Gene collection 1 (N. Satoh)

3 results

ciad007g02

Plate: R1CiGC01n19

cieg008b04

Plate: R1CiGC16p05

cicl047j18

Plate: R1CiGC13o18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Aldolase_II/adducin_N_sf SUPERFAMILY Class II aldolase/adducin N-terminal domain superfamily
Aldolase_II/adducin_N Pfam Class II aldolase/adducin N-terminal
Aldolase_II/adducin_N SMART Class II aldolase/adducin N-terminal
Aldolase_II/adducin_N_sf Gene3D Class II aldolase/adducin N-terminal domain superfamily

GOSlim

37 results

GO Term Annotation Origin Type
RNA binding Blast molecular function
actin binding Blast molecular function
structural molecule activity Blast molecular function
protein binding Blast molecular function
calmodulin binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
brush border Blast cellular component
focal adhesion Blast cellular component
transcription factor binding Blast molecular function
membrane Blast cellular component
nuclear body Blast cellular component
protein kinase binding Blast molecular function
cytoplasmic vesicle Blast cellular component
protein homodimerization activity Blast molecular function
protein heterodimerization activity Blast molecular function
actin filament binding Blast molecular function
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
organelle organization Blast biological process
cell junction Blast cellular component
adherens junction Blast cellular component
cell periphery Blast cellular component
cytoplasmic part Blast cellular component
cytoskeletal part Blast cellular component
macromolecular complex Blast cellular component
organelle Blast cellular component
postsynapse Blast cellular component
neuron part Blast cellular component
cytoskeletal protein binding Blast molecular function
membrane raft Blast cellular component
plasma membrane region Blast cellular component
cell adhesion molecule binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
condensed nuclear chromosome Hs cellular component 136 4.83e-35
RNA binding Hs molecular function 101 4.93e-23
actin binding Hs molecular function 136 4.83e-35
structural molecule activity Hs molecular function 136 4.83e-35
structural constituent of cytoskeleton Hs molecular function 136 4.83e-35
protein binding Hs molecular function 101 4.93e-23
calmodulin binding Hs molecular function 136 4.83e-35
nucleus Hs cellular component 101 4.93e-23
nucleoplasm Hs cellular component 136 4.83e-35
cytoplasm Hs cellular component 136 4.83e-35
cytosol Hs cellular component 136 4.83e-35
cytoskeleton Hs cellular component 136 4.83e-35
plasma membrane Hs cellular component 136 4.83e-35
brush border Hs cellular component 136 4.83e-35
cell-cell junction Hs cellular component 136 4.83e-35
cell-cell adherens junction Hs cellular component 101 4.93e-23
focal adhesion Hs cellular component 101 4.93e-23
cell cortex Hs cellular component 136 4.83e-35
transcription factor binding Hs molecular function 101 4.93e-23
F-actin capping protein complex Hs cellular component 129 1.73e-32
postsynaptic density Hs cellular component 136 4.83e-35
membrane Hs cellular component 136 4.83e-35
nuclear body Hs cellular component 101 4.93e-23
protein kinase binding Hs molecular function 129 1.73e-32
spectrin binding Hs molecular function 129 1.73e-32
cytoplasmic vesicle Hs cellular component 129 1.73e-32
protein homodimerization activity Hs molecular function 129 1.73e-32
plasma membrane raft Hs cellular component 129 1.73e-32
cadherin binding Hs molecular function 101 4.93e-23
protein heterodimerization activity Hs molecular function 129 1.73e-32
actin filament binding Hs molecular function 129 1.73e-32

GO (InterProScan)

No result

GO Term Analysis Type e-value

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