- Gene 'KH2012:KH.C5.181'
Gene Card
Best human hits
PARN; TOE1
Unique Gene ID
Cirobu.g00007045
Gene Model ID
KH2012:KH.C5.181
Location
KhC5:877097..878979
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000003872 |
| NCBI Reference Sequence | XM_002129839.4 |
Gateway full ORF
2 results
cien113031
Plate: VES88_P03
cien32590
Plate: VES75_N11
Gene collection 1 (N. Satoh)
1 result
cicl010j03
Plate: R1CiGC09j07
n/a
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| RNaseH_sf | Gene3D | Ribonuclease H superfamily |
| RNaseH-like_sf | SUPERFAMILY | Ribonuclease H-like superfamily |
| Znf_CCCH_sf | SUPERFAMILY | Zinc finger, CCCH-type superfamily |
| RNase_CAF1 | Pfam | Ribonuclease CAF1 |
| Znf_CCCH | ProSiteProfiles | Zinc finger, CCCH-type |
GOSlim
18 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Orthology | molecular function |
| nucleic acid binding | Orthology | molecular function |
| RNA binding | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Orthology | cellular component |
| nucleolus | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
| cytosol | Blast | cellular component |
| regulation of transcription from RNA polymerase II promoter | Orthology | biological process |
| nuclear body | Orthology | cellular component |
| nuclear speck | Orthology | cellular component |
| hydrolase activity | Orthology | molecular function |
| protein kinase binding | Blast | molecular function |
| cation binding | Blast | molecular function |
| metal ion binding | Orthology | molecular function |
| RNA metabolic process | Orthology | biological process |
| RNA processing | Orthology | biological process |
GO (Orthology)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| 3'-5'-exoribonuclease activity | Hs | molecular function |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Hs | molecular function |
| nucleic acid binding | Hs | molecular function |
| poly(A)-specific ribonuclease activity | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| nucleolus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| regulation of transcription from RNA polymerase II promoter | Hs | biological process |
| Cajal body | Hs | cellular component |
| nuclear body | Hs | cellular component |
| nuclear speck | Hs | cellular component |
| snRNA binding | Hs | molecular function |
| snRNA 3'-end processing | Hs | biological process |
| metal ion binding | Hs | molecular function |
| RNA phosphodiester bond hydrolysis, exonucleolytic | Hs | biological process |
GO (Blast)
23 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| 3'-5'-exoribonuclease activity | Hs | molecular function | 293 | 2.79e-94 |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 293 | 2.79e-94 |
| nucleic acid binding | Hs | molecular function | 293 | 2.79e-94 |
| RNA binding | Hs | molecular function | 52.0 | 5.22e-07 |
| mRNA 3'-UTR binding | Hs | molecular function | 52.0 | 5.22e-07 |
| nuclease activity | Hs | molecular function | 52.0 | 5.22e-07 |
| exonuclease activity | Hs | molecular function | 52.0 | 5.22e-07 |
| poly(A)-specific ribonuclease activity | Hs | molecular function | 293 | 2.79e-94 |
| protein binding | Hs | molecular function | 293 | 2.79e-94 |
| nucleus | Hs | cellular component | 293 | 2.79e-94 |
| nucleoplasm | Hs | cellular component | 293 | 2.79e-94 |
| nucleolus | Hs | cellular component | 293 | 2.79e-94 |
| cytoplasm | Hs | cellular component | 293 | 2.79e-94 |
| cytosol | Hs | cellular component | 52.0 | 5.22e-07 |
| Cajal body | Hs | cellular component | 293 | 2.79e-94 |
| nuclear body | Hs | cellular component | 293 | 2.79e-94 |
| nuclear speck | Hs | cellular component | 293 | 2.79e-94 |
| hydrolase activity | Hs | molecular function | 52.0 | 5.22e-07 |
| snRNA binding | Hs | molecular function | 293 | 2.79e-94 |
| protein kinase binding | Hs | molecular function | 52.0 | 5.22e-07 |
| cation binding | Hs | molecular function | 52.0 | 5.22e-07 |
| metal ion binding | Hs | molecular function | 293 | 2.79e-94 |
| telomerase RNA binding | Hs | molecular function | 52.0 | 5.22e-07 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | Gene3D | molecular function | 1.9E-52 |
| metal ion binding | SUPERFAMILY | molecular function | 2.35E-8 |
