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Gene Card

Best human hits

CDK5R1; CDK5R2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00006881

Gene Model ID

KH2012:KH.C4.760

Location

KhC4:2684446..2689098

Transcript Models and Sequences

  KH2012:KH.C4.760.v1.A.nonSL2-1
KH2012:KH.C4.760.v1.A.SL1-1

External Database Gene Card

External database links

1 result

Database Gene ID
NCBI Reference Sequence XM_002126707.4
Collections

Gateway full ORF

1 result

cien172456

Plate: VES96_G24

Gene collection 1 (N. Satoh)

1 result

cilv029b06

Plate: R1CiGC27d05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
CDK5_activator Pfam Cyclin-dependent kinase 5 activator
Cyclin-like_sf SUPERFAMILY Cyclin-like superfamily

GOSlim

64 results

GO Term Annotation Origin Type
actin binding Orthology molecular function
protein kinase activity Orthology molecular function
calcium ion binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
microtubule Orthology cellular component
plasma membrane Orthology cellular component
axon guidance Orthology biological process
brain development Orthology biological process
cell proliferation Orthology biological process
membrane Orthology cellular component
kinase activity Orthology molecular function
protein kinase binding Orthology molecular function
neuron differentiation Orthology biological process
axon Orthology cellular component
neuron projection development Orthology biological process
neuron projection Orthology cellular component
neuronal cell body Orthology cellular component
intracellular membrane-bounded organelle Orthology cellular component
negative regulation of transcription, DNA-templated Orthology biological process
perinuclear region of cytoplasm Orthology cellular component
actin filament binding Orthology molecular function
cell cycle Orthology biological process
regulation of catalytic activity Orthology biological process
molecular transducer activity Orthology molecular function
protein serine/threonine kinase activity Orthology molecular function
regulation of cellular metabolic process Orthology biological process
microtubule-based process Orthology biological process
organelle organization Orthology biological process
cell migration Orthology biological process
generation of neurons Orthology biological process
enzyme binding Orthology molecular function
cell adhesion Orthology biological process
G-protein coupled receptor signaling pathway Orthology biological process
cellular response to organic substance Orthology biological process
axon development Orthology biological process
binding Orthology molecular function
multicellular organism development Orthology biological process
organelle Orthology cellular component
postsynapse Orthology cellular component
neuron part Orthology cellular component
macromolecular complex Orthology cellular component
protein phosphorylation Orthology biological process
cell projection part Orthology cellular component
axonogenesis Orthology biological process
synapse Orthology cellular component
cell surface receptor signaling pathway Orthology biological process
receptor binding Orthology molecular function
tubulin binding Orthology molecular function
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
positive regulation of apoptotic process Orthology biological process
enzyme activator activity Orthology molecular function
cell adhesion molecule binding Orthology molecular function
cytoskeletal part Orthology cellular component
cell development Orthology biological process
positive regulation of catalytic activity Orthology biological process
membrane organization Orthology biological process
cell morphogenesis involved in neuron differentiation Orthology biological process
neuron projection morphogenesis Orthology biological process
protein targeting to membrane Orthology biological process

GO (Orthology)

68 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
regulation of cyclin-dependent protein serine/threonine kinase activity Hs biological process
microtubule cytoskeleton organization Hs biological process
neuron migration Hs biological process
protease binding Hs molecular function
actin binding Hs molecular function
protein kinase activity Hs molecular function
calcium ion binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
microtubule Hs cellular component
plasma membrane Hs cellular component
neuron cell-cell adhesion Hs biological process
G-protein coupled acetylcholine receptor signaling pathway Hs biological process
axon guidance Hs biological process
axonal fasciculation Hs biological process
brain development Hs biological process
cell proliferation Hs biological process
lipid binding Hs molecular function
embryo development ending in birth or egg hatching Hs biological process
postsynaptic density Hs cellular component
membrane Hs cellular component
regulation of macroautophagy Hs biological process
kinase activity Hs molecular function
cyclin-dependent protein kinase 5 holoenzyme complex Hs cellular component
cyclin-dependent protein kinase 5 activator activity Hs molecular function
peptidyl-serine phosphorylation Hs biological process
peptidyl-threonine phosphorylation Hs biological process
protein kinase binding Hs molecular function
cerebellum development Hs biological process
neuron differentiation Hs biological process
axon Hs cellular component
dendrite Hs cellular component
growth cone Hs cellular component
negative regulation of axon extension Hs biological process
positive regulation of microtubule polymerization Hs biological process
neuron projection development Hs biological process
neuromuscular junction Hs cellular component
regulation of actin cytoskeleton organization Hs biological process
ionotropic glutamate receptor signaling pathway Hs biological process
ionotropic glutamate receptor binding Hs molecular function
neuron projection Hs cellular component
alpha-tubulin binding Hs molecular function
neuronal cell body Hs cellular component
dendritic spine Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
contractile fiber Hs cellular component
positive regulation of neuron apoptotic process Hs biological process
protein serine/threonine kinase activator activity Hs molecular function
cadherin binding Hs molecular function
tubulin complex Hs cellular component
regulation of neuron differentiation Hs biological process
positive regulation of protein kinase activity Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of calcium ion-dependent exocytosis Hs biological process
ephrin receptor binding Hs molecular function
ephrin receptor signaling pathway Hs biological process
perinuclear region of cytoplasm Hs cellular component
beta-tubulin binding Hs molecular function
rhythmic process Hs biological process
actin filament binding Hs molecular function
regulation of dendritic spine morphogenesis Hs biological process
regulation of microtubule cytoskeleton organization Hs biological process
positive regulation of cell cycle arrest Hs biological process
positive regulation of protein serine/threonine kinase activity Hs biological process
positive regulation of protein targeting to membrane Hs biological process

GO (Blast)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protease binding Hs molecular function 222 3.77e-70
actin binding Hs molecular function 222 3.77e-70
protein kinase activity Hs molecular function 222 3.77e-70
calcium ion binding Hs molecular function 222 3.77e-70
protein binding Hs molecular function 222 3.77e-70
nucleus Hs cellular component 222 3.77e-70
nucleoplasm Hs cellular component 222 3.77e-70
cytoplasm Hs cellular component 222 3.77e-70
cytosol Hs cellular component 222 3.77e-70
microtubule Hs cellular component 222 3.77e-70
plasma membrane Hs cellular component 222 3.77e-70
lipid binding Hs molecular function 215 1.30e-66
postsynaptic density Hs cellular component 222 3.77e-70
membrane Hs cellular component 222 3.77e-70
kinase activity Hs molecular function 222 3.77e-70
cyclin-dependent protein kinase 5 holoenzyme complex Hs cellular component 222 3.77e-70
cyclin-dependent protein kinase 5 activator activity Hs molecular function 222 3.77e-70
protein kinase binding Hs molecular function 222 3.77e-70
axon Hs cellular component 222 3.77e-70
dendrite Hs cellular component 222 3.77e-70
growth cone Hs cellular component 222 3.77e-70
neuromuscular junction Hs cellular component 222 3.77e-70
ionotropic glutamate receptor binding Hs molecular function 222 3.77e-70
neuron projection Hs cellular component 222 3.77e-70
alpha-tubulin binding Hs molecular function 222 3.77e-70
neuronal cell body Hs cellular component 222 3.77e-70
dendritic spine Hs cellular component 222 3.77e-70
intracellular membrane-bounded organelle Hs cellular component 222 3.77e-70
contractile fiber Hs cellular component 222 3.77e-70
protein serine/threonine kinase activator activity Hs molecular function 222 3.77e-70
cadherin binding Hs molecular function 222 3.77e-70
tubulin complex Hs cellular component 222 3.77e-70
ephrin receptor binding Hs molecular function 222 3.77e-70
perinuclear region of cytoplasm Hs cellular component 222 3.77e-70
beta-tubulin binding Hs molecular function 222 3.77e-70
actin filament binding Hs molecular function 222 3.77e-70

GO (InterProScan)

2 results

GO Term Analysis Type e-value
cyclin-dependent protein kinase 5 holoenzyme complex Pfam cellular component 7.9E-93
cyclin-dependent protein kinase 5 activator activity Pfam molecular function 7.9E-93

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