Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000024453
NCBI Reference Sequence	XR_001974697.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb2k20

Plate: R1CiGC28h02

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Znf_C2H2_sf	SUPERFAMILY	Zinc finger C2H2 superfamily
Znf_C2H2_type	ProSitePatterns	Zinc finger C2H2-type
Znf_C2H2_type	ProSiteProfiles	Zinc finger C2H2-type
Znf_C2H2_type	SMART	Zinc finger C2H2-type

GOSlim

26 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Blast	molecular function
nucleic acid binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
zinc ion binding	Orthology	molecular function
nuclear body	Blast	cellular component
macromolecular complex	Orthology	cellular component
identical protein binding	Blast	molecular function
protein homodimerization activity	Blast	molecular function
sequence-specific DNA binding	Blast	molecular function
transcription regulatory region DNA binding	Blast	molecular function
metal ion binding	Orthology	molecular function
protein heterodimerization activity	Blast	molecular function
protein oligomerization	Orthology	biological process
transcription factor binding	Blast	molecular function

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
zinc ion binding	Hs	molecular function
protein domain specific binding	Hs	molecular function
macromolecular complex	Hs	cellular component
metal ion binding	Hs	molecular function
protein heterooligomerization	Hs	biological process

GO (Blast)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	147	1.70e-40
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	88.6	4.46e-19
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	147	1.70e-40
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	88.6	4.46e-19
nucleic acid binding	Hs	molecular function	147	1.70e-40
DNA binding	Hs	molecular function	147	1.70e-40
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	88.6	4.46e-19
protein binding	Hs	molecular function	88.6	4.46e-19
nucleus	Hs	cellular component	147	1.70e-40
nucleoplasm	Hs	cellular component	88.6	4.46e-19
cytoplasm	Hs	cellular component	88.6	4.46e-19
cytosol	Hs	cellular component	88.6	4.46e-19
plasma membrane	Hs	cellular component	88.6	4.46e-19
zinc ion binding	Hs	molecular function	147	1.70e-40
nuclear body	Hs	cellular component	87.0	1.44e-18
protein domain specific binding	Hs	molecular function	147	1.70e-40
macromolecular complex	Hs	cellular component	147	1.70e-40
identical protein binding	Hs	molecular function	88.6	4.46e-19
protein homodimerization activity	Hs	molecular function	88.6	4.46e-19
bHLH transcription factor binding	Hs	molecular function	87.0	1.44e-18
sequence-specific DNA binding	Hs	molecular function	88.6	4.46e-19
transcription regulatory region DNA binding	Hs	molecular function	88.6	4.46e-19
metal ion binding	Hs	molecular function	147	1.70e-40
protein heterodimerization activity	Hs	molecular function	88.6	4.46e-19

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
nucleic acid binding	SMART	molecular function	0.0015

Gene Card

Best human hits

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Transcript Models and Sequences