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GENE CARD

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  1. Gene 'KH2012:KH.C4.336'

Gene Card

Best human hits

LRRC1; LRRD1; SHOC2

Unique Gene ID

Cirobu.g00006419

Gene Model ID

KH2012:KH.C4.336

Location

KhC4:3455695..3462321

Transcript Models and Sequences

  KH2012:KH.C4.336.v1.A.ND1-1

External Database Gene Card

External database links

No result

Collections

Gene collection 1 (N. Satoh)

1 result

cinc024e02

Plate: R1CiGC45g20

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Leu-rich_rpt ProSiteProfiles Leucine-rich repeat
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily
Leu-rich_rpt_typical-subtyp SMART Leucine-rich repeat, typical subtype
Leu-rich_rpt Pfam Leucine-rich repeat

GOSlim

14 results

GO Term Annotation Origin Type
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
basolateral plasma membrane Blast cellular component
cytoplasmic part Blast cellular component
macromolecular complex Blast cellular component
enzyme binding Blast molecular function
protein dephosphorylation Blast biological process
regulation of cellular metabolic process Blast biological process
enzyme regulator activity Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein phosphatase type 1 complex Hs cellular component 186 2.32e-50
protein binding Hs molecular function 186 2.32e-50
nucleus Hs cellular component 186 2.32e-50
nucleoplasm Hs cellular component 186 2.32e-50
cytoplasm Hs cellular component 186 2.32e-50
cytosol Hs cellular component 186 2.32e-50
plasma membrane Hs cellular component 162 1.70e-42
protein phosphatase 1 binding Hs molecular function 186 2.32e-50
membrane Hs cellular component 162 1.70e-42
basolateral plasma membrane Hs cellular component 184 2.71e-48
protein phosphatase regulator activity Hs molecular function 186 2.32e-50
protein phosphatase binding Hs molecular function 186 2.32e-50

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 5.0E-9