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GENE CARD

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Gene Card

Best human hits

VANGL1; VANGL2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00006242

Gene Model ID

KH2012:KH.C4.173

Location

KhC4:3195659..3203796

Transcript Models and Sequences

  KH2012:KH.C4.173.v1.A.SL1-1
KH2012:KH.C4.173.v1.A.SL3-1
KH2012:KH.C4.173.v1.A.SL4-1
KH2012:KH.C4.173.v2.A.SL1-1
KH2012:KH.C4.173.v2.A.SL3-1
KH2012:KH.C4.173.v2.A.SL4-1
KH2012:KH.C4.173.v3.R.ND2-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000003625
NCBI Reference Sequence XM_002121917.3
NCBI Reference Sequence XM_009860016.2
Collections

Gateway full ORF

2 results

cien118837

Plate: VES88_P20

cien143804

Plate: VES92_J17

Gene collection 1 (N. Satoh)

2 results

ciad005e21

Plate: R1CiGC01o06

citb038h05

Plate: R1CiGC32f23

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
VANGL PIRSF Vang-like protein
VANGL Pfam Vang-like protein
VANGL PANTHER Vang-like protein

GOSlim

37 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
plasma membrane Orthology cellular component
multicellular organism development Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
basolateral plasma membrane Orthology cellular component
apical plasma membrane Orthology cellular component
regulation of Wnt signaling pathway Orthology biological process
wound healing Orthology biological process
cell periphery Orthology cellular component
cytoskeletal part Orthology cellular component
anatomical structure morphogenesis Orthology biological process
anatomical structure formation involved in morphogenesis Orthology biological process
nervous system development Orthology biological process
heart development Orthology biological process
cell surface receptor signaling pathway Orthology biological process
cell-cell signaling Orthology biological process
animal organ development Orthology biological process
cell junction Orthology cellular component
small GTPase mediated signal transduction Orthology biological process
protein metabolic process Orthology biological process
plasma membrane part Orthology cellular component
cytoplasmic vesicle Orthology cellular component
organelle organization Orthology biological process
developmental process Orthology biological process
positive regulation of catalytic activity Orthology biological process
intracellular signal transduction Orthology biological process
protein serine/threonine kinase activity Orthology molecular function
cellular response to stress Orthology biological process
positive regulation of signal transduction Orthology biological process
protein localization Orthology biological process
cellular process Orthology biological process
cell division Orthology biological process
system development Orthology biological process
neuron development Orthology biological process
neuron projection development Orthology biological process
cell part Orthology cellular component

GO (Orthology)

42 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
stress fiber Hs cellular component
establishment of planar polarity Hs biological process
neural tube closure Hs biological process
heart looping Hs biological process
planar cell polarity pathway involved in axis elongation Hs biological process
protein binding Hs molecular function
plasma membrane Hs cellular component
cell-cell junction Hs cellular component
Rho protein signal transduction Hs biological process
multicellular organism development Hs biological process
anterior/posterior pattern specification Hs biological process
heparan sulfate proteoglycan biosynthetic process Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
basolateral plasma membrane Hs cellular component
apical plasma membrane Hs cellular component
lateral plasma membrane Hs cellular component
regulation of Wnt signaling pathway Hs biological process
COPII-coated ER to Golgi transport vesicle Hs cellular component
glomerulus development Hs biological process
regulation of actin cytoskeleton organization Hs biological process
somatic stem cell population maintenance Hs biological process
non-canonical Wnt signaling pathway Hs biological process
post-anal tail morphogenesis Hs biological process
wound healing Hs biological process
pigmentation Hs biological process
positive regulation of JUN kinase activity Hs biological process
apical protein localization Hs biological process
establishment or maintenance of epithelial cell apical/basal polarity Hs biological process
somatic stem cell division Hs biological process
establishment of body hair planar orientation Hs biological process
digestive tract morphogenesis Hs biological process
convergent extension involved in axis elongation Hs biological process
convergent extension involved in organogenesis Hs biological process
Wnt signaling pathway, planar cell polarity pathway Hs biological process
inner ear receptor cell development Hs biological process
inner ear receptor stereocilium organization Hs biological process
cell pole Hs cellular component
cell periphery Hs cellular component
regulation of establishment of planar polarity Hs biological process
planar cell polarity pathway involved in neural tube closure Hs biological process
non-motile cilium assembly Hs biological process

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
stress fiber Hs cellular component 389 4.91e-130
protein binding Hs molecular function 476 4.82e-164
plasma membrane Hs cellular component 476 4.82e-164
cell-cell junction Hs cellular component 389 4.91e-130
membrane Hs cellular component 476 4.82e-164
integral component of membrane Hs cellular component 476 4.82e-164
basolateral plasma membrane Hs cellular component 389 4.91e-130
apical plasma membrane Hs cellular component 389 4.91e-130
lateral plasma membrane Hs cellular component 476 4.82e-164
COPII-coated ER to Golgi transport vesicle Hs cellular component 389 4.91e-130
cell pole Hs cellular component 389 4.91e-130
cell periphery Hs cellular component 389 4.91e-130

GO (InterProScan)

2 results

GO Term Analysis Type e-value
multicellular organism development Pfam biological process 8.1E-216
integral component of membrane Pfam cellular component 8.1E-216

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