Aniseed - Gene card

Gene 'KH2012:KH.C3.86'

Gene Card

Best human hits

PTPN23; RHPN1; RHPN2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00006070

Gene Model ID

KH2012:KH.C3.86

Location

KhC3:4214578..4228671

Transcript Models and Sequences

KH2012:KH.C3.86.v1.A.SL1-1
KH2012:KH.C3.86.v2.A.SL1-1
KH2012:KH.C3.86.v3.A.ND2-1

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000004372
NCBI Reference Sequence	XM_002122892.4
NCBI Reference Sequence	XM_018811254.1
NCBI Reference Sequence	XM_018811255.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciht023h09

Plate: R1CiGC43b06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
HR1_rho-bd	Pfam	HR1 rho-binding domain
PDZ_sf	SUPERFAMILY	PDZ superfamily
BRO1_dom	Pfam	BRO1 domain
BRO1_dom	ProSiteProfiles	BRO1 domain
HR1_rho-bd	SMART	HR1 rho-binding domain
HR1_rpt_sf	SUPERFAMILY	HR1 repeat superfamily
BRO1_dom	SMART	BRO1 domain
BRO1_sf	Gene3D	BRO1 domain superfamily

GOSlim

23 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Orthology	cellular component
endosome	Blast	cellular component
early endosome	Blast	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Blast	cellular component
protein dephosphorylation	Blast	biological process
signal transduction	Orthology	biological process
dephosphorylation	Blast	biological process
nuclear body	Blast	cellular component
hydrolase activity	Blast	molecular function
protein kinase binding	Blast	molecular function
cytoplasmic vesicle	Blast	cellular component
cell projection	Blast	cellular component
perinuclear region of cytoplasm	Orthology	cellular component
extracellular exosome	Blast	cellular component
organelle	Blast	cellular component
plasma membrane region	Blast	cellular component
macromolecular complex	Blast	cellular component
cell projection part	Blast	cellular component
microtubule organizing center	Blast	cellular component

GO (Orthology)

5 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
signal transduction	Hs	biological process
perinuclear region of cytoplasm	Hs	cellular component

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
phosphoprotein phosphatase activity	Hs	molecular function	114	1.04e-25
protein tyrosine phosphatase activity	Hs	molecular function	114	1.04e-25
protein binding	Hs	molecular function	466	3.05e-155
nucleus	Hs	cellular component	114	1.04e-25
nucleoplasm	Hs	cellular component	114	1.04e-25
cytoplasm	Hs	cellular component	466	3.05e-155
endosome	Hs	cellular component	114	1.04e-25
early endosome	Hs	cellular component	114	1.04e-25
cytosol	Hs	cellular component	466	3.05e-155
cytoskeleton	Hs	cellular component	114	1.04e-25
cilium	Hs	cellular component	114	1.04e-25
nuclear body	Hs	cellular component	114	1.04e-25
hydrolase activity	Hs	molecular function	114	1.04e-25
phosphatase activity	Hs	molecular function	114	1.04e-25
protein kinase binding	Hs	molecular function	114	1.04e-25
cytoplasmic vesicle	Hs	cellular component	114	1.04e-25
ciliary basal body	Hs	cellular component	114	1.04e-25
cell projection	Hs	cellular component	114	1.04e-25
perinuclear region of cytoplasm	Hs	cellular component	466	3.05e-155
extracellular exosome	Hs	cellular component	114	1.04e-25

GO (InterProScan)